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GT21307

CSHL Arabidopsis genetrap mutant lines

Original: GT21307

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21307

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3875856 [Map]; Strand: c
      • AT3G12145.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT21307 - 5-prime edge 
    CCCGAACCGA CTGTTGTACC GGCTGGACCG GCGTCGAATG CACTAACCGT 
    CGCGTTACCG GTCTCAGCGT TACCTCCGGC GAAGTCTCCG GTCAGATCTC 
    GTACCAGATC GGCGACCTCG TTGACCTCCG TACACTAGAT TTCAGCTACC 
    TGCCACACCT CACCGGAAAC ATCCCACGCA CCATCACCAA ACTCAAGAAC 
    CTCAACACTC TCTACTTGAA GCACACTAGT CTCTCCGGTC CGATTCCTGA 
    TTACATCAGC GAGCTCAAGA GCCTCACGTT CTTGGACCTT TCTTTTAACC 
    AATTTACCGG TCCAATTCCC GGTTCGCTAT CTCAGATGCC GAAGCTTGAA 
    GCCATTCAAA TCAACGATAA TAAGCTAACC GGTTCTATAC CAAACTCTTT 
    CGGTTCTTCT CTCTCGACCA AAAATAATCT CTACTTGTCT AACAATAAGC 
    TGTCAGGTAA TTAGCCATCA TTTTCCATTT CTTTAATAGT TAATACTATG 
    CTTTTGGTCA AATGGTTATT TATTAGTTTT TGGCTT

AT3G12145.1

Model type
Protein coding
Short Description
Leucine-rich repeat (LRR) family protein
Curator Summary
A novel leucine-rich repeat protein. Interacts directly with MADS domain transcription factor.
Computational Description
FLOR1 (FLR1); FUNCTIONS IN: enzyme inhibitor activity, transcription factor binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: polygalacturonase inhibiting protein 1 (TAIR:AT5G06860.1); Has 42601 Blast hits to 16185 proteins in 663 species: Archae - 31; Bacteria - 1045; Metazoa - 3045; Fungi - 233; Plants - 35461; Viruses - 0; Other Eukaryotes - 2786 (source: NCBI BLink).
Link
InterPro Scan - TAIR