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GT21405

CSHL Arabidopsis genetrap mutant lines

Original: GT21405

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21405

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 17760577 [Map]; Strand: c
      • AT3G48100.1 - [+] show detail - response regulator 5
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT21405 - 5-prime edge 
    TGATAGTATG GTTGATCGGA AGTTCATCGA GCGGTTACTC AGAGTCTCAT 
    CTTGTAAAGG TAACTGTTGT GTTTGTGTTT ATCAAAAAAA AGTGTTGTGT 
    TTGTTTATCT TGTGTAATCT GTTTAAGTAC AAGAATCTGA CATTAGTTTT 
    GTTCTGTCTC AGTTACTGTT GTCGATAGTG CGACAAGAGC TTTACAATAT 
    CTTGGATTAA ATGGAGAGAA TAATAGTTCG GTTGGATTTG AGGTAATAAA 
    TCTGATCATT GTGTTTAATA TTTTTGAGAG TGAGAATCCA TTCAAATTTG 
    GTGTTAAAAG ATTTTTGGTT TGAAATTATA TTTTAGGATC TGAAGATTAA 
    TTTGATAATG ACGGATTACT CTATGCCTGG GATGACTGGA TATGAACTAC 
    TGAAGAAGAT CAAAGTAAGT TTTGTTGATG AGTCAATTGA TTTCACAAAA 
    TTAAAATGAA TTTCTAATTT GACAAAAAAA AATTTAAAAA AAAGTGAGGG 
    TTTAATCTCC TCTTGTTTAT GAATTTTGAA TTTTTAAAAG GGAATCCTCA 
    AATTTAAAAA AAAT

AT3G48100.1

Model type
Protein coding
Short Description
response regulator 5
Curator Summary
Encodes a transcription repressor that mediates a negative feedback loop in cytokinin signalling. ARR5 expression is upregulated by Class I KNOX genes. Arr5 protein is stabilized by cytokinin in a two-component phosphorelay.
Computational Description
response regulator 5 (RR5); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 6 (TAIR:AT5G62920.1); Has 45766 Blast hits to 45301 proteins in 2636 species: Archae - 240; Bacteria - 40380; Metazoa - 18; Fungi - 471; Plants - 1420; Viruses - 2; Other Eukaryotes - 3235 (source: NCBI BLink).
Link
InterPro Scan - TAIR