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Mutant Lines
GT21529

GT21529

CSHL Arabidopsis genetrap mutant lines

Original: GT21529

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21529

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 14316694 [Map]; Strand: c
- AT4G29050.1 - [+] show detail - Concanavalin A-like lectin protein kinase family protein
  Distance: 0; Region: exon1 (CDS)
- AT4G29060.1 - [+] show detail - elongation factor Ts family protein
  Distance: -562; Region: promoter
- AT4G29060.2 - [+] show detail - elongation factor Ts family protein
  Distance: -562; Region: promoter

GGAATTGCAA TTACTAACTC CAAAGGCTTG ATGAAGCTCA CAAATTCGTC 
TGAATTCTCA TATGGTCACG TTTTCTACAA CTCTCCAGTT AGATTCAAGA 
ACTCACCAAA AGGTACCGTT TCGTCTTTCT CCACTACCTT TGTTTTCGCT 
ATAGTCTCTA ATGTTAATGC ACTTGATGGC CATGGACTTG CATTTGTCAT 
CTCTCCCACC AAAGGCTTGC CCTATAGTTC ATCCTCACAA TATCTAGGGC 
TCTTTAATTT GACAAACAAT GGAGATCCCT CTAATCATAT TGTAGCAGTT 
GAGTTTGATA CATTTCAAAA TCAAGAATTT GATGACATGG ATAATAACCA 
TGTTGGTATT GACATCAATA GCTTGAGCTC AGAGAAAGCT TCTACAGCAG 
GTTATTACGA AGACGATGAT GGTACTTTCA AAAACATCCG CCTCATAAAT 
CAAAAACCTA TACAAGCCTG GATTGAATAT GATTCCTCAA GGAGACAACT 
TAACGTCACA ATCCATCCTA TTCATCTCCC TAAGCCAAAG ATTCCATTGC 
TTTCTCTAAC CAAAGATTTA TCTCCATATC TTTTCGACTC TATGTATGTT 
GGCTTCACTT CAGCCACAGG CCGTCTTCGT TCATCTCACT

AT4G29050.1

Model type: Protein coding
Short Description: Concanavalin A-like lectin protein kinase family protein
Computational Description: Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: carbohydrate binding, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Legume lectin, beta chain, Mn/Ca-binding site (InterPro:IPR019825); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT1G70110.1); Has 123408 Blast hits to 121938 proteins in 4814 species: Archae - 120; Bacteria - 14220; Metazoa - 44809; Fungi - 10855; Plants - 34836; Viruses - 425; Other Eukaryotes - 18143 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G29060.1

Model type: Protein coding
Short Description: elongation factor Ts family protein
Computational Description: embryo defective 2726 (emb2726); FUNCTIONS IN: RNA binding, translation elongation factor activity; INVOLVED IN: translational elongation, response to cadmium ion, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor Ts, conserved site (InterPro:IPR018101), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: translation elongation factor Ts (EF-Ts), putative (TAIR:AT4G11120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G29060.2

Model type: Protein coding
Short Description: elongation factor Ts family protein
Computational Description: embryo defective 2726 (emb2726); FUNCTIONS IN: RNA binding, translation elongation factor activity; INVOLVED IN: translational elongation, response to cadmium ion, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor Ts, conserved site (InterPro:IPR018101), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: translation elongation factor Ts (EF-Ts), putative (TAIR:AT4G11120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR