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GT21638

CSHL Arabidopsis genetrap mutant lines

Original: GT21638

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21638

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4366726 [Map]; Strand: w
      • AT1G12805.1 - [+] show detail - nucleotide binding
        Distance: 0; Region: exon1 (5UTR)
      • AT1G12810.1 - [+] show detail - proline-rich family protein
        Distance: -530; Region: promoter
      • AT1G12810.2 - [+] show detail - proline-rich family protein
        Distance: -530; Region: promoter
    Flanking Genome Sequence: GT21638 - 5-prime edge 
    CTCTTTATTT CATAATCATT TCCATAAATT ACACCCTCAA AGGTTTTCCA 
    CTTCTTAAAT CCCTTTTTAT CAAATGGATG TCTTTATATC GGAAGAGTAT 
    ATCAACCGCC GGAGATTGGA GAAAAAAGCT GCCACCGTTG CCGGAAAAAG 
    CATGAGGTTT GGCTCAGCTT CAAGCAAGAC ACCAGAGAAG AGAAATAGTT 
    ACCCTCGGAT ATCGGAATCT CCGCCAGATA ATGAGTTCCG GGTCACTGGC 
    GGGGATGTTT ATGATAGCTT TGCCTTTGTG TTCCACTGCT TCTCGCCGTA 
    AAAAAAACAA AGCGTTTGTG TTTAGCGATC AAAATGCATG CGCAATAGTA 
    TATGCATGGG AACTTTATTA GTTGTAGCTC TCGTTTTTCT AACATTTACT 
    TGAAAAAATA ATTCTTCTTA ACACTGTTTT TCTGAATGAT GGATAGAATT 
    TCATGTTTAC CAAATAAGTG GATAGGCCCA ATAGCAAACA AACGAATAAA 
    TAAAAATTAT TATCGGCCCA AATCCAATAA GAACGTGAGC AACATGATTT 
    TAGTGACACG TGAATTTACT TAAATGAAAA GAAAAGCCTG GCACTTAAAA 
    TATATTTATA TTTTCCAATA ATCTCAAAAA AAAACTCTCT GATTCGAAAA 
    GTGAAATTTG ATTTTGACAA AAAAAAAT

AT1G12805.1

Model type
Protein coding
Short Description
nucleotide binding
Computational Description
nucleotide binding; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G12810.1

Model type
Protein coding
Short Description
proline-rich family protein
Computational Description
proline-rich family protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33520.1); Has 20080 Blast hits to 10426 proteins in 614 species: Archae - 4; Bacteria - 1877; Metazoa - 7835; Fungi - 2952; Plants - 4732; Viruses - 459; Other Eukaryotes - 2221 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G12810.2

Model type
Protein coding
Short Description
proline-rich family protein
Computational Description
proline-rich family protein; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 236 Blast hits to 228 proteins in 57 species: Archae - 0; Bacteria - 8; Metazoa - 108; Fungi - 38; Plants - 63; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Link
InterPro Scan - TAIR