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GT21646

CSHL Arabidopsis genetrap mutant lines

Original: GT21646

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21646

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 16564149 [Map]; Strand: c
      • AT2G39710.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: -769; Region: promoter
    Flanking Genome Sequence: GT21646 - 5-prime edge 
    ATCACCAAAT CTCTATAATA ATCATACTTA CTGTAACAAC TTTGTAAAAC 
    TAGATTGGTC TTAAAAGATT AACCAAATCA TTCAAAAACA AAAAGAACAA 
    TCCTTTAAAT TATGAACTTG CTTGTTTTTT GTTAAACTAA GTTACGCTTT 
    TGCGTATATA GCAATCATAG TACATGATGC ATTCTATCAA AAGAAAATCA 
    AATTATAATC TGCAACCATC CTTATTCTTA TCACTCAACT AGGTTTTTGG 
    ATTTAATATA TAGAACTTTT ACACGATATC TCTCTTACGA TTAATCTAAT 
    GTAGATATGA TTTAGAAAAT TAAAAAGTAA AATCTGCCTA AAACAGAAAG 
    AAAACTAAAA AAATGTAAGG GATCCCGGAG AAAGTGGGAA CACAAAGAAA 
    GTAGAAAACA AAGTTGATGT GAACTACAGA GACTAAACAG AAACCACAAA 
    GACACGGCCA AAAAGACCTA CTCCTCCACT CACACTCACT TGTCTTTTGG 
    GTTTTGTCTC GAGACTTGGC TCCCTCCAAA CCCTAAAAAA ATTCAAATGA 
    ATTCGACAAC ACCAAACCCC TAATAATCTT CATGAAATGA TATTTGTTAG 
    GTCGAGACAA AATTATGTTT TGAATAGTAT AAGTTATAGT TTCCTAAGTG 
    GTTAATTTGG TCAATGACTT GACTTGCTAC TAGAATTATT GCTTAGACGT 
    TAACTCAAGT TTTTGTCACC TAAAAT

AT2G39710.1

Model type
Protein coding
Short Description
Eukaryotic aspartyl protease family protein
Curator Summary
Encodes a Cysteine-rich peptide (CRP) family protein
Computational Description
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G02190.1); Has 2560 Blast hits to 2551 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 620; Fungi - 65; Plants - 1821; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).
Link
InterPro Scan - TAIR