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GT21656

CSHL Arabidopsis genetrap mutant lines

Original: GT21656

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21656

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 15870215 [Map]; Strand: w
      • AT3G44110.1 - [+] show detail - DNAJ homologue 3
        Distance: 0; Region: intron3 (CDS)
      • AT3G44110.2 - [+] show detail - DNAJ homologue 3
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: GT21656 - 5-prime edge
    GGCATGTTGC TCATAAAACC ACCAGCTTAG GCCATCAAAA TAAAGTTCAA 
    GCTTCAGCTA ATTTATAGGT ATACCGAAAA CGTACAAGAA TGACGTCGAG
    TGAACGAATG TACTAACTGA TACACTTTGA GCAGAGAGCA TTCCTAGAAA
    GTGAAAGCTT CTTCATTGTT CAAGGTACAA TCCTCAAGAG AAACCTTCAA
    ATCATTCAAA AGAAAATTCT CAATTTATGA TATCAAGGTT AAGAAACTCA
    CAAAACCCAG ATTTTGAATA ACCAACACCA TCACCGATGA TCGACGCCGC
    TAAATCTGTA GAATCTGAGA AATCTCCAGT TTTATCACCG TTGGCCGCTA
    AAGAGAGAGA AATTTTACAT AACATTGATA CCAAAAAAAA AAAAAAAAAA
    AAAAAGGGAA ACCCCCCCCT TTTTTTTTCT TTTTTTAAAA AAATTTAAAA
    AACCCAAAAG GCCCCCCCCG CCCCCCCTTC AAATTCCCAA AAATTTTTTT
    AAAAAACCCC CCCTTTTTAA AAAATTTTTT TTTTTTTTTT TTTTTTTCCC
    AAAAAAAAAA AAAACCCCTT TAAATTTTAT AAAAAAACCC CGGTTTTGGA
    AAGGGCCAAG GCCCCAAAAA AAACCCCCGT TTCTTTTTTT TCCCTTGGGT
    TTAAACCTTT TAATTTTCCC CCCTTTTTTT TCCTTT

AT3G44110.1

Model type
Protein coding
Short Description
DNAJ homologue 3
Curator Summary
homologous to the co-chaperon DNAJ protein from E coli
Computational Description
DNAJ homologue 3 (ATJ3); FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to salt stress, regulation of ATPase activity; LOCATED IN: nucleolus, cell wall, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ (InterPro:IPR003095), Chaperone DnaJ (InterPro:IPR012724); BEST Arabidopsis thaliana protein match is: DNAJ homologue 2 (TAIR:AT5G22060.1); Has 26899 Blast hits to 26588 proteins in 3465 species: Archae - 213; Bacteria - 10134; Metazoa - 4292; Fungi - 2434; Plants - 2563; Viruses - 88; Other Eukaryotes - 7175 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G44110.2

Model type
Protein coding
Short Description
DNAJ homologue 3
Curator Summary
homologous to the co-chaperon DNAJ protein from E coli
Computational Description
DNAJ homologue 3 (ATJ3); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, response to salt stress, regulation of ATPase activity; LOCATED IN: nucleolus, cell wall, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ homologue 2 (TAIR:AT5G22060.1); Has 26521 Blast hits to 26345 proteins in 3465 species: Archae - 213; Bacteria - 10015; Metazoa - 4280; Fungi - 2432; Plants - 2547; Viruses - 88; Other Eukaryotes - 6946 (source: NCBI BLink).
Link
InterPro Scan - TAIR