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GT21791

CSHL Arabidopsis genetrap mutant lines

Original: GT21791

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21791

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 10795660 [Map]; Strand: c
      • AT5G28765.1 - [+] show detail - transposable element gene
        Distance: -2146; Region: intergenic
      • AT5G28770.1 - [+] show detail - bZIP transcription factor family protein
        Distance: 799; Region: intergenic
    Flanking Genome Sequence: GT21791 - 5-prime edge 
    CATATTTCAG CTTCATACTC CGTATTTCAC CAGATCCATT TGCAGCGTTT 
    TTGAGAAGGT AGAAAACCGA TGTCCTTGAA TCTTCAAATC TATTAAACTC 
    CGGAATCTGC GAGAAGATGA GATGTTGAAT TAGTCGCTAT ACGTTGCTTT 
    GCTAATTTGG TCTCAAACAA ACACGAAATC CAACCTTCAC GATTCACAAG 
    CTCAAAGAGA AACCAACATC CAAAGCCGAT TAGATGGCCA CTAGACGGTA 
    TGAAGATTTA CTCTCCTCAA GAATCAAGAT CGAGCAGATG AAAATTCAGA 
    AATCTTGGAA TTATCCCTCA GATTTTGCAT CTAACGACAT CTGCAAAAGG 
    AAAAGAGAAG AAAAACTGAA AAGAAATAGC CACAAATGCT AACAAAAGCT 
    CGCACGAGAG AAACAAGCCG TACTTTGCCG GAAACCAAAA AAAAGTAATT 
    ATGATGCATT TTGTTTTTGT TATTTCATCT TAAATTACTT TATTACAGAA 
    TTTAGAAGGG ATACACATTC GCTAGAGATG GCGAACCTCT CTCTTTCTCC 
    CTCCTCTACT ACTTTTGAGA GAGAGGGAGG TTCTTCAAGT CATCACCATC 
    CAGCTTATTT TGCTGGATTT TGTGATCGAC CGAGGTTTGG TATCATCGTC 
    AGTTCAGCCG TTAACACGAC TTTTCCGTTG TCGTGTTTTT GCCGTCAACA 
    CGATTTTTCC GTTATCGTTT TCTTGATGTC CGCTTCCATT CGAATCTCCG 
    ATAGCTTTCT CTG

AT5G28765.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
Mutator-like transposase family, has a 1.9e-70 P-value blast match to O22278 /203-375 Pfam PF03108 MuDR family transposase (MuDr-element domain)
Link
InterPro Scan - TAIR

AT5G28770.1

Model type
Protein coding
Short Description
bZIP transcription factor family protein
Curator Summary
bZIP protein BZO2H3 mRNA, partial cds
Computational Description
BZO2H3; FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616), Basic leucine-zipper, C-terminal (InterPro:IPR020983); BEST Arabidopsis thaliana protein match is: basic leucine zipper 25 (TAIR:AT3G54620.1); Has 2647 Blast hits to 2627 proteins in 198 species: Archae - 0; Bacteria - 8; Metazoa - 224; Fungi - 122; Plants - 2188; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).
Link
InterPro Scan - TAIR