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GT21827

CSHL Arabidopsis genetrap mutant lines

Original: GT21827

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21827

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3777284 [Map]; Strand: w
      • AT5G11720.1 - [+] show detail - Glycosyl hydrolases family 31 protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT21827 - 5-prime edge 
    GTGAGCGTTT GAGAATCAGA ATCACAGACT CTAGTCAACA AAGATGGGAG 
    ATACCGGAAA CCGTTATTCC TCGTGCCGGA AACCACTCTC CTCGCCGTTT 
    CTCAACGGAG GAAGACGGAG GAAACTCTCC GGAGAACAAT TTCTTAGCAG 
    ATCCCTCATC GGACTTGGTT TTCACTCTCC ACAACACGAC GCCGTTTGGT 
    TTCTCCGTCT CCCGACGTTC CTCCGGCGAT ATCCTCTTCG ACACATCGCC 
    GGATTCATCA GATTCAAACA CTTACTTCAT CT

AT5G11720.1

Model type
Protein coding
Short Description
Glycosyl hydrolases family 31 protein
Computational Description
Glycosyl hydrolases family 31 protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: apoplast, vacuole, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-xylosidase 1 (TAIR:AT1G68560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR