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GT21829

CSHL Arabidopsis genetrap mutant lines

Original: GT21829

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21829

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3777289 [Map]; Strand: w
      • AT5G11720.1 - [+] show detail - Glycosyl hydrolases family 31 protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT21829 - 5-prime edge 
    CGTTTGAGAA TCAGAATCAC AGACTCTAGT CAACAAAGAT GGGAGATACC 
    GGAAACCGTT ATTCCTCGTG CCGGAAACCA CTCTCCTCGC CGTTTCTCAA 
    CGGAGGAAGA CGGAGGAAAC TCTCCGGAGA ACAATTTCTT AGCAGATCCC 
    TCATCGGACT TGGTTTTCAC TCTCCACAAC ACGACGCCGT TTGGTTTCTC 
    CGTCTCCCGA CGTTCCTCCG GCGATATCCT CTTCGACACA TCGCCGGATT 
    CATCAGATTC AAACACTTAC TTCATCTCAC TCGA

AT5G11720.1

Model type
Protein coding
Short Description
Glycosyl hydrolases family 31 protein
Computational Description
Glycosyl hydrolases family 31 protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: apoplast, vacuole, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-xylosidase 1 (TAIR:AT1G68560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR