1. Home
  2. Mutant Lines
  3. GT22109

GT22109

CSHL Arabidopsis genetrap mutant lines

Original: GT22109

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22109

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18067773 [Map]; Strand: w
      • AT3G48740.1 - [+] show detail - Nodulin MtN3 family protein
        Distance: -13018; Region: intergenic
      • AT3G48745.1 - [+] show detail - pre-tRNA
        Distance: -1305; Region: intergenic
    Flanking Genome Sequence: GT22109 - 5-prime edge 
    TTTCTCCCTG GCTATTTACA CGTAAACCAC ATTCTCTTAA TTTAGCTAGT 
    ATTTTAGTTA AGAGTGTAAT CTCTTAAATG CATTACGATA ATATTTTTCT 
    AAGTGTGCAG ATAGTATATA TAGAAACAAA GTTTTATCTA CTCGTAAACT 
    AATTCACATT AACTACTACT TGAGATTAAA CCAATATAAG TTTGCTTCGG 
    TTTGAAACAA AACAAGAGCT TGTCACTTTG TTGCGTTTTG ACAGTTCATC 
    TCACTCGAC

AT3G48740.1

Model type
Protein coding
Short Description
Nodulin MtN3 family protein
Computational Description
Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G48745.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Gln (anticodon: TTG)
Link
InterPro Scan - TAIR