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GT22420

CSHL Arabidopsis genetrap mutant lines

Original: GT22420

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22420

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10057902 [Map]; Strand: w
      • AT1G28620.1 - [+] show detail - pseudogene, lipase, similar to lipase Arab-1 GB:S68410 GI:2129636 (Arabidopsi...
        Distance: -83; Region: promoter
    Flanking Genome Sequence: GT22420 - 5-prime edge 
    ATAAAGCTAA ATATAGTAGT TATACTTATA TGCTTTTTAG GTCACAAGTT 
    AATTATTATT AATTTTATTT TTGTGCACAA ACTTATGCTT TAGGCCGATA 
    TAGTAATTTA TCATAGCCTA GAATAGTGAA CCGTAGCTAG TTGAAGGAAT 
    ATGCATGTGT AGTCTAGGCT ATGATAATTG ATTGGTTGAA AATACATATA 
    AATTAGTGGT TCATCTCTCT CGACTACATA TGGACGGAAA TATTCGCTCG 
    CACTAAGTAT TTATACTCAC TCTTGTTTAG ATCATGCAGA TAATGGCCAT 
    GAGTTTAACT CTATAAGGAG CACCAGTACG ATGTTGGTTT TGGGTGCGAG 
    TATAAATATT TATATATCTA ATGAAAAAAG ATGAGTAATA TATATGTGGG 
    GGGGGTTTTT TTTCTAAATG GAA

AT1G28620.1

Model type
Pseudogene
Computational Description
pseudogene, lipase, similar to lipase Arab-1 GB:S68410 GI:2129636 (Arabidopsis thaliana); blastp match of 44% identity and 1.2e-48 P-value to GP|7523500|dbj|BAA94228.1||AP001633 unnamed protein product {Oryza sativa (japonica cultivar-group)}
Link
InterPro Scan - TAIR