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Mutant Lines
GT22894

GT22894

CSHL Arabidopsis genetrap mutant lines

Original: GT22894

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22894

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 1792461 [Map]; Strand: c
- AT3G05970.1 - [+] show detail - long-chain acyl-CoA synthetase 6
  Distance: -659; Region: promoter
- AT3G05975.1 - [+] show detail - Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
  Distance: 0; Region: exon1 (CDS)

TTTTCTCCCT GTGCTGGAGA TGCTGCTCAA GAATCCTAAC GTTGCGGATT 
TTGAATACAA GACAGTGGAA AGCTTGGTTT ATTACAGGGA TACACTAGTG 
GGAAATCTCA CTCTTCCTTC GAGCACATTA CCTGCCAAAG GTTCAGTGCT 
TTTGCCATGT CCTCTGTTTC TTCACCTCGA TAAATTTGTC GCGAATTTAG 
GTGATATCGT GCAAGATGTA TTGCATGGAA AAATTGTGAT GGAGACAAGA 
GCAAAAATGC CAGGAAAAAT CACTTTGTTG GGAATCTTTA AGATACCTTT 
GGATTCAATA TCGCATTGCA ATCTCGTACT CGGCTTTCCT TCAATGGTAG 
TGGAGGACCA AGTGTGTGAT CTCAAAACCA AGCTGTAAAT AGTTTTTTCA 
GGTAAACATT TAGGCTTAAG AGAGCAGTTT AATTCTAGCT AGTTTCCTGT 
AATAATAAAG ATTGTAGTGA TCTTGATCGC TGTTCTTTAA TCAACTCCAT 
TTTTGTGAGT TCTTGAAATT AAATGTATTC CTTTGAATTT GAAATAATGA 
ATTTGATTCA AAAATCTGAA TTATTTTATT TTTACCTCCA TTTGAAAAAA 
GGAAAAATAG TGTATTATTT TTTATTTTTT TTATGACAAA TAATTTGGAG 
AAGACTTGAA AACACGAAAT CAACGGATAG CGACATCATG AAACAGAGTT 
AGAAAAGCGT GCCTCCTTTT TTTAGTATCT ATCTTTCTCT CTTTCGGATC 
ATTCTCTCCT CTGATTCCGA ATCGGGTAAA TTATTATGGA TTCTTCTTCT 
TCGTCTTCCT CCG

AT3G05970.1

Model type: Protein coding
Short Description: long-chain acyl-CoA synthetase 6
Curator Summary: encode peroxisomal long-chain acyl-CoA synthetase (LACS) isozymes
Computational Description: long-chain acyl-CoA synthetase 6 (LACS6); FUNCTIONS IN: long-chain fatty acid-CoA ligase activity; INVOLVED IN: long-chain fatty acid metabolic process; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: long-chain acyl-CoA synthetase 7 (TAIR:AT5G27600.1); Has 54528 Blast hits to 52136 proteins in 3333 species: Archae - 925; Bacteria - 35165; Metazoa - 2570; Fungi - 2253; Plants - 2087; Viruses - 1; Other Eukaryotes - 11527 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G05975.1

Model type: Protein coding
Short Description: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Computational Description: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT3G54200.1); Has 227 Blast hits to 226 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR