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GT23276

CSHL Arabidopsis genetrap mutant lines

Original: GT23276

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23276

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3557751 [Map]; Strand: c
      • AT3G11340.1 - [+] show detail - UDP-Glycosyltransferase superfamily protein
        Distance: 0; Region: exon2 (CDS)
      • AT3G11350.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
        Distance: -744; Region: promoter
    Flanking Genome Sequence: GT23276 - 5-prime edge
    TGTTGCACGG TGAGCTAAAA CTTCAGGCTG AGGTGCCCAT TTCACTATTT 
    TACACCGGCC CTCGAGATTT TTGATGAACC CTTTAGGCAG AATCTCGATC
    CATTCTTTCC CGTGGATTAA ACCGGGTCTA ACCACCCATA GAAAAGGTTG
    GTTGCTGTTT CTTAGACCCC AAGCAATCTC CAAGAATTCA GATTCATCGA
    TCGAAGCAAT GCTTCCAAGA CTTGCGTAGA TTACGGAATT TGTTGCTTGC
    TTGTCTAACC AGGAGAGACA AGTCATGTCG TGTGCAAGTA AGCTACTGGA
    TGAAGCTGAA ACGTACCTGT GAAAGGGTCC AATACAGAAG AGTGGAACTG
    GGAATTCTAT GCGGGCTTCA TCAAGCTGAT CTGTTTCAAG ATCTTCAATG
    GCGTTGAATA TGATTCCTGA GGAAGACTTT AGTGACTTC

AT3G11340.1

Model type
Protein coding
Short Description
UDP-Glycosyltransferase superfamily protein
Computational Description
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 76C1 (TAIR:AT5G05870.1); Has 7583 Blast hits to 7530 proteins in 440 species: Archae - 0; Bacteria - 352; Metazoa - 2017; Fungi - 25; Plants - 5047; Viruses - 86; Other Eukaryotes - 56 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G11350.1

Model type
Protein coding
Short Description
Pentatricopeptide repeat (PPR) superfamily protein
Computational Description
Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G11380.1); Has 397 Blast hits to 332 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 397; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR