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GT23293

CSHL Arabidopsis genetrap mutant lines

Original: GT23293

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23293

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7221057 [Map]; Strand: c
      • AT1G20790.1 - [+] show detail - F-box family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT23293 - 5-prime edge
    CTGCCTATGC CTATGCCCAT GGCCATGGCT ATGCCTATGC CTATGCCTAT 
    GCCTATGCCT ATGCCCATGA CCAAGACCGA GACCGAGACC GTTACCAGAT
    CTGAAGTCAT CTCATCTGTA ATGGCTATTA TGGGTCTGGT TAATCGTACT
    TTGTCTTTTA TTTAACTAAA TTAGTTTATT TAAAGGGTGC GAAGAAAGAG
    TTGTTTTTGT TCTTCCCAAA TCTCAAATCA GTTTGTGTGA AGCTTAAAAC
    GTTTTACAAA TTGGTTTAAT CTATGAACTC AATATATATT TGATGCAAAA
    GTAAGCACAA CTCCCTCCGC AACACACATA AGCCTTTTTA ATCTGAGGCC
    AATCAAATGA TTTCGATTTC CAACGTAGGA TTTATAAACA AACAAATCAA
    ATAGCTTAAA GCACACGCAA ATAAGAATCG GAATTTACAA TATATACCCA
    GAAAAAAACT GGATGCCTAT TAACAAGTAA TCCCATCAAA ACAAAAACCA
    CAGTTTTAAA ATCACTATAA CTCACTGGAC AGTTTCAAAG AGATTTTCCC
    TATGCGATGT TTGGGAATAT ACTTGAGAAG TTTGGGATCT TATCAATGTG
    TTTCAACGCG TTCTCAGCGA TCTGTCTCGT TCTAAAATCA ACGTTTTGGA
    AAGCGTCCAC AAGTGCAGCG CTCAAGCTCT GTTCCTCTGC CACCTCTCTT
    GCTATGTC

AT1G20790.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G20795.1); Has 1819 Blast hits to 716 proteins in 166 species: Archae - 2; Bacteria - 445; Metazoa - 392; Fungi - 63; Plants - 395; Viruses - 75; Other Eukaryotes - 447 (source: NCBI BLink).
Link
InterPro Scan - TAIR