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GT23311

CSHL Arabidopsis genetrap mutant lines

Original: GT23311

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23311

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3875685 [Map]; Strand: c
      • AT3G12145.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT23311 - 5-prime edge 
    TCCCACGCAC CATCACGAAA CTCAAGAACC TCAACACTCT CTACTTGAAG 
    CACACTAGTC TCTCCGGACC GATTCCTGAT TACATCAGCG AGCACAAGAG 
    CCTCACGTTC TTGGACCTTT CTTTTAACCA ATTTACCGGT CCAATTCCCG 
    GTTCGCTATC TCAGATGCCG AAGCTTGAAG CCATTCAAAT CAACGATAAT 
    AAGCTAACCG GTTCTATACC AAACTCTTTC GGTTCATCTC ACTCGA

AT3G12145.1

Model type
Protein coding
Short Description
Leucine-rich repeat (LRR) family protein
Curator Summary
A novel leucine-rich repeat protein. Interacts directly with MADS domain transcription factor.
Computational Description
FLOR1 (FLR1); FUNCTIONS IN: enzyme inhibitor activity, transcription factor binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: polygalacturonase inhibiting protein 1 (TAIR:AT5G06860.1); Has 42601 Blast hits to 16185 proteins in 663 species: Archae - 31; Bacteria - 1045; Metazoa - 3045; Fungi - 233; Plants - 35461; Viruses - 0; Other Eukaryotes - 2786 (source: NCBI BLink).
Link
InterPro Scan - TAIR