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GT23700

CSHL Arabidopsis genetrap mutant lines

Original: GT23700

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23700

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 20133775 [Map]; Strand: w
      • AT3G54366.1 - [+] show detail
        Distance: 25; Region: intergenic
      • AT3G54380.1 - [+] show detail - SAC3/GANP/Nin1/mts3/eIF-3 p25 family
        Distance: 118; Region: intergenic
    Flanking Genome Sequence: GT23700 - 5-prime edge 
    GGTTTATGTA TCTGATATGG TTTGTGCTGA TAATAAAATT AGCTTTGTGA 
    AAAAAAAAAA AAAAAAAAAA AAACCCCTTT AACCCTTTCC GGGGGGAATT 
    TTTTTAAAAA AGGGTTTTTC CCCCAAAAGG GTAAAACCCT TTAAACCCCT 
    TTAATTTTTG GGTTTTTAAA TTTTTTTGGG GAACCTTCGG GTGGGAAAAA 
    AAATTTAAAA TTTGGGGGTT TTAAAAATTT ATTTTTTTTT TTTTCAAAAA 
    AAAAAAAAAA ATTTTAAAAC GGGAAAGGGG TTAAAACCCC CTTTTAACCC 
    CTTTATTTCC AAAAAAAAAA AAAATTTTAA ATTTTCCCCC GGGAAAAAAA 
    AAGGGGGAGG GTTTCCGGGG AAAAAAAGGG AACCCCCCGG GAAAAAAAAT 
    TTTCCCAAAA CCCACCCCTG GGGAAAAAAA TTCCCACCCC CCCCCCCGAA 
    AAAAAAAAAT TTTTTTTTAG AATTTTTAGT TTTCCCCCCA AACCAAAAAA 
    AAAAAAAAAA AAAAAGGGGG AAAATTTTTT CCCGGGGGGG TTTTTCCCCT 
    TTTTTTTCCG GTTAAAAAAA ACCCCCAAAA AGGAAAGGGG GTGAATTTGT 
    GTCAAAAAAT TTTTTTTTTT TTGGAACCCC C

AT3G54366.1

Model type
Other RNA
Curator Summary
Unknown gene
Link
InterPro Scan - TAIR

AT3G54380.1

Model type
Protein coding
Short Description
SAC3/GANP/Nin1/mts3/eIF-3 p25 family
Computational Description
SAC3/GANP/Nin1/mts3/eIF-3 p25 family; CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); BEST Arabidopsis thaliana protein match is: SAC3/GANP/Nin1/mts3/eIF-3 p25 family (TAIR:AT3G06290.1); Has 539 Blast hits to 535 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 200; Plants - 96; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
Link
InterPro Scan - TAIR