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GT24122

CSHL Arabidopsis genetrap mutant lines

Original: GT24122

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24122

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21564243 [Map]; Strand: c
      • AT3G58210.1 - [+] show detail - TRAF-like family protein
        Distance: -176; Region: promoter
    Flanking Genome Sequence: GT24122 - 3-prime edge 
    TTACCGACCG TTACCGACCG TTTTCATCCC TAACGACCAT AAGAAAAGTC 
    TAAACACTTT GTGCATCGTG ACTAACAGTG AAATCATCTA ACTACTTCAT 
    TGGCTCTACC AGACTGGTCA CTGGATGAAG CCAAGGCAGT GAGATCTGTC 
    TTGAAATAAA CAAAAACTTG ATGAACTTAA TAGATGAAGC TCAAAACTGA 
    AAATTGAAAG CGTATTATAC ACGTAATCAG CTCTTTGCCG GTGATGATCT 
    GTTTCTTATA TACTTGATGA GCCAAAAGGC ATTGCTTTTT CATTACTAGA 
    CGCATGCTTT TACATTATCC TACTGAGTCA TCATTACAAA ATGTCGAAAT 
    CCTACTGAGT CATCATTACA AAAAGTGGAA ACTTGATTCC GACAAGGGTC 
    ACTCTACCTT CCTAAGTTAT AAGGGGACTC TAATTACGAT ATACTAAAAC 
    GAACAGACAA GGACACACCA TGCAGAACCC AAGTCATCAG ACAAAATCAT 
    CCAAAGTTAG AGAAGCTCGG GCAGCCAACA CTTTTGCCTT CTCTTTTTCC 
    AGCAAAGCTT CCCTGTCTAA GCACTTCTGC TTAAATTCCT TCAATTCCTC 
    CTCTAATTCT TGAATCCGGG TCTTACCAGT CTGCTCTACC ACTTTCTTTT 
    CTTTTACTTC CTT

AT3G58210.1

Model type
Protein coding
Short Description
TRAF-like family protein
Computational Description
TRAF-like family protein; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: Arabidopsis phospholipase-like protein (PEARLI 4) with TRAF-like domain (TAIR:AT3G58270.2); Has 1155 Blast hits to 996 proteins in 134 species: Archae - 2; Bacteria - 3; Metazoa - 121; Fungi - 102; Plants - 866; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink).
Link
InterPro Scan - TAIR