1. Home
  2. Mutant Lines
  3. GT24346

GT24346

CSHL Arabidopsis genetrap mutant lines

Original: GT24346

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24346

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21563037 [Map]; Strand: w
      • AT3G58210.1 - [+] show detail - TRAF-like family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT24346 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTACTTGCAG GTGGATTTTG 
    TGAAGCGTAT TTTTGAAAAA CATCCAGACA TTGCAAAAGA TTTCCGTCCA 
    AAGAACCCAC ATCTGAGGAA AGCATGCATG AATTTCTTGC TCAGCTTAAT 
    GGAGACATTG TGCCAACCAC CTCAGAAGCT ATCAAATGAA GATCTTGTGG 
    AAGCAGACAA TGCACTGACA TACGTGAAAG TTTCGGGGTT TAAAGTGGAT 
    TGGTTGGAGA AAAAGCTAGA GGAAGTGAAG AAAAAGAAGG AGGAAGAACA 
    GACTGGTGAG GCTCGAATTC AAGAACTAGA GGAGGAATTG AAGGAATTTA 
    AGCAGAAGTG CTTAGATAGG GAAGCTATGC TGGAGAAAGA AAAGGCAAAG 
    GTGTTAACAG CTAGAGCTCC TCTAACATTG GATGATGTTA TTTAATGACT 
    TTTGGCATGT TCTGGTCTTT GTTTGTTTGT TTGTTCGTTT GAGTCTATGT 
    TTCGAAATTG GAGTCTTCTT AAAACTTAGA TAGCTAGACA GACCTATGTG 
    TCTTCCTTTC TTTTTGTACC TATGGGAATG ACTAATACTG TACAAAGGTT 
    GATGATGCCT TCAATTTCAG CTATCAAATC AATAGGGAAA ACCAGTTTCC 
    ATTA

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21563129 [Map]; Strand: w
      • AT3G58210.1 - [+] show detail - TRAF-like family protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: GT24346 - 5-prime edge 
    TGATTAAAAA AAAAGGCAAG ATTTTTGATA ACTCTTTGTG AGGTTGAAAT 
    TTCTACAAAA CTCTTAAAAG TTTTCTTACC TGGGAAGGAA GAACTTGAAA 
    ACCATTGACG TCCATGAGTT CACTAACCGG TGGAGTCTCG TTGATCATCA 
    AATCATTAGA CTCCACATGA TCATAATCTA CCTTTACCTT TTTCATAGGT 
    TGGGTAACTT GGGTTTCCTC TTCAAATTCC TCCGGTACAT CTAGTTTGCC 
    AATAACTTCA AGAACATTTA CCTCAGCAAC TATCTTGAGT TCATCATTCA 
    CAAGAAATCC ACCATCTTTG GCATGAAGTT TAGTAAGGGG AATCATTGCT 
    GACAAACCCC AACCTGGAAT CTTTTGATTA AACCACTTAG TTGCTTCTGT 
    AAAATCACAA AAGCAAAATT CATCTAATCA GTAAATTTAA CTATGAACCT 
    GTAGATTATG AAAACAATAT TCAAAACTTG GCAAAAAACT TGAAAACTAA 
    ACCAAACCCC AAAAAAAACA CAAAAACACG CTTCAAAAAC ATATAATATT 
    CCAAGTCCAA AAACAAGCCT CACAAAACAT AAAAACTGAA AATTACTTAA 
    CTGGTTTATC TGACTAATTA ATTAGGTTGG AAAAAGGGAA AAAAAAAATT 
    ACCGTTTCCT TT

AT3G58210.1

Model type
Protein coding
Short Description
TRAF-like family protein
Computational Description
TRAF-like family protein; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: Arabidopsis phospholipase-like protein (PEARLI 4) with TRAF-like domain (TAIR:AT3G58270.2); Has 1155 Blast hits to 996 proteins in 134 species: Archae - 2; Bacteria - 3; Metazoa - 121; Fungi - 102; Plants - 866; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink).
Link
InterPro Scan - TAIR