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GT24357

CSHL Arabidopsis genetrap mutant lines

Original: GT24357

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24357

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14302098 [Map]; Strand: w
      • AT2G33800.1 - [+] show detail - Ribosomal protein S5 family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24357 - 3-prime edge 
    ACCGTTACCG ACCGTTTTCA TCCCTAATTG CTCCCGAAGG ATTCGTCTCT 
    CCTCCGTATT TCGACGAAGG AAGCGACGAG ACAGAGGAAG AGATCGCTAC 
    CGCTTTTGAA GAGCTCTATG GACCTGCGTA TAGTGGTGAG AGTATGCTTG 
    GGAAAGATAT TTATGTGATG GACTCAAAGC ATAAGAAGAG TTCAGGTATT 
    GGTGGGAAGC CAAAGAAAGA TAAGATTAGA GATGGGTTTG AAGAGAGAGT 
    TGTGCAAGTT AGGAGAGTGA CTAAGGTTGT TAAAGGAGGG AAGCAATTGA 
    AGTTTAGAGC TATCGTTGTT GTTGGTGATA AACAAGGGAA TGTTGGTGTT 
    GGTTGTGCTA AGGCTAAAGA AGTTGTTGCT GCTGTTCAAA AATCTGCTAT 
    TGATGCTAGG AGAAACATTG TTCAAGTTCC TATGACTAAG TATTCTACTT 
    TCCCTCACAG GTAATCAAAG TTTTGGACTT GATGTTTGTA ATGTGTGTTA 
    ATTGTTGGAA AAATTGGTTT TGGATGGTAA AAGTCTTACT TGGTGATGAA 
    CTAAAATTTT GGGATTAGTA TTGTGCAGTC ATGTGTTGGA TTTGTGATGG 
    GTTTGTTTGG TTTACAGATT GGTGTTATGG TACTTGTTTT ACAAAACTGA 
    TGTTTG

AT2G33800.1

Model type
Protein coding
Short Description
Ribosomal protein S5 family protein
Computational Description
Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: response to cadmium ion, response to cold, translation; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5, bacterial-type (InterPro:IPR005712), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G64880.1); Has 8967 Blast hits to 8967 proteins in 2880 species: Archae - 262; Bacteria - 5121; Metazoa - 552; Fungi - 265; Plants - 165; Viruses - 0; Other Eukaryotes - 2602 (source: NCBI BLink).
Link
InterPro Scan - TAIR