GT7196

CSHL Arabidopsis genetrap mutant lines

Original: GT7196

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT7196

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15246072 [Map]; Strand: c
      • AT2G36360.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: intron7 (CDS)
      • AT2G36360.2 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: intron7 (CDS)
      • AT2G36360.3 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: intron7 (CDS)
      • AT2G36360.4 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: intron7 (CDS)
      • AT2G36360.5 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: intron7 (CDS)
    Flanking Genome Sequence: GT7196 - 3-prime edge 
    GTTTTCATCC CTACATCAAA CACATTTACA TCCTAAACAC TGTTTGATGA 
    CCGAAAAGGC GGAATAGCAA AGTAACATTT GACATTGACT TTTATATCTA 
    TCAGGAGTCT GCTCTTGAGC AATCACACTT ATTAGTTCCA GTGTTCAGTA 
    AAATAAAGGG AAAAAAAACT TGAGTAACAA TATTTTCTAT GTACTGAATA 
    TACCAAACAC CTAAACATAT TTAAGGAATG AATCAAGGTG AATTCAGAAG 
    CCAGCAGCAA GAATTTTCAA AGTTTTGGTG TAGCCTACCT CGGCCACCGA 
    AAACAAGTAA TCGTTTCTCC ACCATGGTGG CCGTATGACC ACATCTAGGA 
    GGTGGCAATG ACCCTGAAAC CGATAGCTCC AGCCATTCAA GGGACACTAA 
    TGGATACCAA GAGAGTAAGC ATTATCAGCA AATAAAAACC GTTTATTGCA 
    GAACTAAAAC TAGAATAGAG AAATGAAG

AT2G36360.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1); Has 9801 Blast hits to 4098 proteins in 334 species: Archae - 8; Bacteria - 328; Metazoa - 3175; Fungi - 1216; Plants - 2882; Viruses - 0; Other Eukaryotes - 2192 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G36360.2

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G36360.3

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1).
Link
InterPro Scan - TAIR

AT2G36360.4

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kelch repeat type 1 (InterPro:IPR006652), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1).
Link
InterPro Scan - TAIR

AT2G36360.5

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1).
Link
InterPro Scan - TAIR