K01212

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01212

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01212

Determination of introduced cDNA(s)

  • J023081G15 - Rice Full-length cDNAs - Original: J023081G15

    full reading [+] show sequence

    Nucleotide sequence: J023081G15 - full reading 
    GCGGCTCCCA CTTCCTTTGG ATGATTTTAT CTGCAAAGTG GTTACAGAGT 
    TCAACTCTTC GCTAAGATGG GCTCACCTGT GCAAAGATTA GAGAGGAGGA 
    GCCCTTCTTG AGCTCAGAGG TGCAGTGCAG GCTTGCAGCG GAGTTGTTCA 
    CTTGTAGGCT CCTTCCTTAA CCTGCTCAAT GTATCATAGC CGCTCCAAGA 
    GATAGGATCA GTTCTTGGCT AATGCCTAAT GATCTTGACG AATTTGCATC 
    GGCAGCGACT CTGTTAGAAT GCTCAGAATG GATGGCACGG ATTTGTCTTC 
    CCCAAGGTGC AATGTTCAGC ATCTACAGAA TGCCGAAGAA CTGAAGGATC 
    AGAATAGCAC CAATAAGAGG CTGCCCCGGA CTACAGAGCT CCCATGCTCT 
    TTGATACAAG AGGTCCAACA CCTTGAGAAG CGACTAAATG ATCAATTTGC 
    TATGCGGCGT GCTTTGGAGA AAGCATTAGG TTATAAGCCT TGTGCCATTC 
    ATTCATCCAA TGAGAGCTGC ATTCCAAAGC CTACTGAGGA ACTAATAAAG 
    GAGATTGCTG TGCTGGAGCT AGAGGTCATA TGCTTGGAGC AACATCTCCT 
    AGCACTCTAC CGGAAGGCCT TTGATCAACA AATTTGCAGC GTGTCTTCTT 
    CCTGTGACAT GGAAATCAAC AAGCAGTCAG CAAGGTCATT CTCAGGTATA 
    CTCACAGGAT CTTCAGAACT GGATTTCTCA ACCCCAAGGA AACACCAACT 
    CCTGCAGTCC AGTGGCATGG TCATGGCACG CAAGTCTACA CCGACAACTC 
    TCACTAGCGA AACCAGAACT TCACATTACA ATGACAAGAC TGGTATCGGA 
    CGCAGCCATT CCTCGCTCCT GCAGCGTTCC ATTTGTTCAG CCAGAGTATC 
    TCCTTCAGCA AACAATCTTG CTAGGGCTCT CAAACCATGC CATACTTTGC 
    CTCTATCCTT TGTCGAGGAG GGCAAGTGCA TGGATCCTGG TATTGTGAGC 
    CTGGCGGATA TCCTAGGGAC CAGGATAGCA GATCATGTTC CTCAAACACC 
    GAACAAAATA TCTGAGGACA TGATCAAATG CATTGCTTCG ATATACATAA 
    GGATTAGGGA CTTCAATGCC GTGCAACATC CCTTCTTCCC CTCACCATGC 
    TCATCATTTT CATCAGCGAG CGGGCTCTCT TCCAAATACA CTGGGGATAT 
    ATGGAGCCCA AGATGTAGGA AAGAGGGCTA TATTGAGGCC TGGCAAGACG 
    ATGCGTTAGG AACTGGCGAA TCAAGATACT TCAGTCAACA ATATGATTCT 
    GTGATTGAGG TGTCTGCTCT TTGCAAGGGG GCCCAGAGGT CTGCTGATGT 
    TAAAGACATG CTACACAAAT ACAAGTCTCT TGTACAGCTG CTAGAAAGTG 
    CTGATCTCAA CGGAATGAAA AATGAAGAAA AAATTGCTTT CTGGATCAAT 
    GTGCACAATG CCATGATGAT GCATGCCCAT ATAGAATACG GGATTCCGCA 
    AAGTAACAGC AAGAGAATAT TGCTTACTAA GTTATCTTAC CTCATCAGTG 
    GCCAGAGAGT AAACCCGGAG TTGATAGAGT ACCATATCCT ATGCTGCCGA 
    GTGCACTCTC CTACACAGTG GCTGAGACTA CTCCTGTACC CGAAATGGAA 
    GTCCAAGGAG AAGGAAGACC TGCAGGGGTT CGCCGTCGAC AGGCCGGAGC 
    CGCTGGTGCA CTTCGCGCTG TCGTCGGGGA GCCACTCCGA CCCGGTGGTG 
    CGGTTGTACC GGCCGGAGCG CCTCCTCCAG CAGCTGGAGG CGGCGAGGGA 
    CGAGTTCGTC CGCGCCAACG TCGGCGTCCG CGGGGGGCGG CGCGGGCGCG 
    GGCGCCGGGT GCTCCTCCTC CTCCCGAAGC TCCTCGAGCC GTACTCGAGG 
    GACGCCGGCC TCGGTGCGCA CGACCTCCTC CGCGCGGTGG AGTCCTGCCT 
    CCCGGAGCCG CTCCGGCCGG CGGCGCAGCA GGCGGCGCGG TCGCGCGGCG 
    GCGGCGGCGG CGTCGAGTGG AGGCCCCACA ACCCGGCCTT CCGCTACCTG 
    CTCGCGCGGG AGCTCGTGGG CCCACCCGCG CCAACGGCCC ACCTATCCTC 
    CACGTAAAGT TTCACGGCCC AATGTACAGA GCCTTGTAAA GTTGATATTT 
    TGGGCCCGGC CCAACAAACT TGGAAAGTTA GTTATCTGGG CCTGAAAAGA 
    GGCCGTGGCT TTTGGAACGT TCT

    Gene models with high sequence identity

    1. AT5G66600.4 [+] show detail - Protein of unknown function, DUF547
      E-value: 1e-96; Score: 351.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Protein of unknown function DUF547 6.5e-32
    Coil coiled-coil 0
    HMMPanther UNCHARACTERIZED 1.7e-78

    See the detailed result >

    AT5G66600.4

    Model type
    Protein coding
    Short Description
    Protein of unknown function, DUF547
    Computational Description
    Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT2G23700.1).
    Link
    InterPro Scan - TAIR