K02233

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K02233

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K02233

Determination of introduced cDNA(s)

  • J023110H11 - Rice Full-length cDNAs - Original: J023110H11

    full reading [+] show sequence

    Nucleotide sequence: J023110H11 - full reading 
    GATCTCAACA TTTCACAAAT CAATCCAAAA GGCTTACAAG AGAAGCAACC 
    ATCCGGAAGA AGATGGCCAT GGCGACGTCC TCCGCATCCA CCGTCTCCTT 
    CTCCGCCCGC CCGTCCGCCG CGAGCGCGGT CCGGCCGTGC GCCGCCGCGG 
    GGAGGGCGAG GGCGCGGGCG GCGGCGGGGG AGAGCGGCAA GTGGTGGGCG 
    CCGCTGCTGG GGTGGTCGGG GAAGGCCGAC TACATCGAGG CCCCGGCGCC 
    GGCGGTGGTG GCGGCGGCGG AGGAGAGCGA GGCGCGGAGG CGGCCGTTCG 
    TGGGCGGGTT GACGGAGGAG AAGGCGCGGG AGCTGCGCGC AAGGATGGTG 
    GAGACGGAGA GCTTCCACGA CGCCATGTAC CACTCCGCCA TCGCCTCCCG 
    CCTCGCCCGC TCCGCCTAGG CGCGCCGCTG CCGCCGCCAC CGGAGGAGGG 
    AGATGGAGCC CACAGCTCGC GACGTCGCCG CGATGGCGTG TATATAAAAT 
    CCGGGGTGGG ATTCGTCTCG TTGCGGAGGA AATTTAGAAG AATTTAGAAG 
    GGATCTGGTT TTTAGGATTG ATCCCTTGCT TCCATCCATC TCTGCTTTTT 
    TTTTTCTTGC GTTTTCTCCC GAATTGTAAT CTCGAGATGA AATGTAATCT 
    GGATCTGAGA TAGATCTACT CGCTTGTGGC GAAGTATGAT GCATCAGATC 
    CATTAGGTTT GTTGTACTGC TCATTTCCAA TCGATTGGAT CCAATTCTGA 
    TCCC

    Gene models with high sequence identity

    1. AT3G15630.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 5e-06; Score: 48.50

     

    InterPro Scan Digest

    Program Description E-value
    FPrintScan PRICHEXTENSN 2e-10
    FPrintScan PRICHEXTENSN 2e-10
    FPrintScan PRICHEXTENSN 2e-10
    FPrintScan PRICHEXTENSN 2e-10

    See the detailed result >

    AT3G15630.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52720.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR