K07213

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K07213

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K07213

Determination of introduced cDNA(s)

J033087M07 - Rice Full-length cDNAs - Original: J033087M07

full reading [+] show sequence

GACCCAATCT CCCGGTGCGC AGCGGCGAGC GACATGGAGC TCCGCGAGCT 
CGGCGCCACG GGCCTCCGCG TCAGCCCCGT CGGCTTCGGC GCCTCCCCTC 
TCGGCCATGT CTTCGGCGAC GTCCCCCGCG ACGTCGCCCG CGCCGCCGTC 
CGCCGCGCCC TCGACCTCGG CATCAACTTC TTCGACACAT CCCCGTACTA 
CGGCGGCACG GTGTCGGAGT CGGTGCTCGG GGACTGCCTC CGCGCCGCGG 
GCGTGCCGCG GGACCGGTTC GTGGTCGCCA CCAAGTGCGG GCGCTACAGG 
GAAGGGTTCG ACTTCAGCGC CGCCCGCGTC ACCCGCAGCG TCGACGAGAG 
CCTCGCACGC CTCGGCCTCG ACTACGTCGA CATCCTCCAC TGCCACGACA 
TCGAGTTCAC CGACCTCGAC CAGATTGTGA ATGAGACGAT TCCGGTGCTC 
CAGAAGATCA AGGAGAGCGG GAAGGCGCGG TTCATCGGGA TAACCGGGCT 
GCCATTGAGC ATCTACACTT ATGTGCTCGA CCAGGTGCCG CCAGGTTCTG 
TGGATGTGAT TCTGTCTTAC TGCCACTATG GGATCAATGA TACCGCGCTT 
GTGGATTTGC TTCCCTACCT GAAGAGCAAA GGTGTTGGCG TGATCAGTGT 
TTCACCTCTT GCAATGGGGC TTCTTACAGA TAACGGGCCA CCCGAATGGC 
ACCCTGCACC GAAAGAACTA AAGTTGGCAT GCAGGGCAGC AGCAGATCAC 
TGTAAGAAGA AGGGGAAAAA CATTACAAAG CTAGCTATGC AGTACAGCTT 
GATGAACAAT GAGATTTCCA CGGTTCTTGT TGGAATGAAC TCTCCAGAAC 
AGGTAGAGGA GAATGTGGCT GCTGCAATTG AATTGTCTAC TTCCGGTATT 
GATAAAGAAC TTCTGCACGA AGTTGAAGCA ATTCTTGAGC CTGTCAAGAA 
CATGACCTGG TCCAGTGGCA TTGAGCAAGC CTGATATCTG GCAGCAGCCT 
GGCTCATTAT AATTCATTCA TGTATTCATT GAGTCAATTG TTTGCATTGC 
AATATTTCAA TGGTGAGCAA AGGAAAGTCA TCATCGGAAA TTCGTTGGTA 
TGTTGTCTGT ATCAATTTAG AAGTCTGTGA ATAGACAAAC AGCCAAACAT 
GGATGCTGAT AATAATGGAA TAAGTTGTGC CCATGCACCT TGCTGTAATG 
AGGCTTGTAT ATTGCTTCAA CTACAAACTG TACCAAAAAA CAAATTGCAA 
ACCAATAATT TGCCGATGCA AAAGG

Gene models with high sequence identity

AT4G33670.1 [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
E-value: 1e-128; Score: 456.00

InterPro Scan Digest

Program	Description	E-value
superfamily	Aldo/keto reductase	6.2e-72
HMMPanther	ALDO-KETO REDUCTASE	1.7e-100
HMMPanther	Aldo/keto reductase	1.7e-100
Gene3D	Aldo/keto reductase	2.6e-67
HMMPfam	Aldo/keto reductase	1.7e-63

See the detailed result >

AT4G33670.1

Model type: Protein coding
Short Description: NAD(P)-linked oxidoreductase superfamily protein
Curator Summary: Encodes a L-galactose dehydrogenase, involved in ascorbate biosynthesis
Computational Description: NAD(P)-linked oxidoreductase superfamily protein; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60750.1); Has 28637 Blast hits to 28630 proteins in 2499 species: Archae - 653; Bacteria - 20546; Metazoa - 1049; Fungi - 1796; Plants - 827; Viruses - 0; Other Eukaryotes - 3766 (source: NCBI BLink).
Link: InterPro Scan - TAIR