K09442

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K09442

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K09442

Determination of introduced cDNA(s)

J023007C07 - Rice Full-length cDNAs - Original: J023007C07

full reading [+] show sequence

GCTTTTCCAA CGACTTCTTC TTCTTCCTGC TCTACCTTCT TGGCTTTTGC 
CTCTGTTCCT CTTCCAAGAT TTGCGAGATG GTGGCGGTGA CGCCGGGCAG 
GCGCCGCCGG CCTGCAGGAT GCGCCGCGGG GCACCACCAC CAGCACCAGC 
AGCAGAGGCT GCTGGCCGTC GCCGCCCGCC TCGCCGCGGC GAAGCCGGCG 
GCCACTACGG AGGCCGCCGT GTACGGTGGC GTAGGAGGAG GAGGATGCTG 
CCTCGAGTTC CTCGACTGCG TGCTCCGGGC GATGGGCGTC GCCACCCCGG 
CCGAGATCAT GCCCCCCGCG GACTTCAGGT GGGCCGCGCG CCCGATGCGG 
CGGCGCCGCC GCGGGGGCTC CTCGTCCTCC TCCTCCTCGC CGCGCGACCG 
CGAGCCGAGG GACGGCCGGA TCGCCGCCAA CGGCGCCTCC GCTGCCGCCT 
CGCTCTACAC GATGCGGGGC AACAAGGGCG TCAACCAGGA CGCCATGCTT 
GTCTGGGAGA ATTTCTGTTC AAAGGAAGAT ACAATTTTTT GTGGTGTTTT 
TGATGGCCAT GGACCATATG GCCATTTGGT GTCCAAGAGG GTCAGAGATC 
TCCTCCCTAT AAAGTTGAGT GCAAATTTAG GAAGAGATGG ACACAAAGAA 
ACTTCAACTA ACATTGTCAC AAGCAGCATG ACTGAAGGTG GTGGCACCGA 
ACGCATGGAT AGAGATACTG AAACTCCCCT GGGAACGGAG GAGAATGGAG 
ACTACCCCGA GATGTTTGCT GCATTAAGAA CTTCATTATT AAGGGCATTT 
TATGTAATGG ACAGGGATCT TAAGTTTCAT AAAACCATTG ACTCTGTGTT 
CAGTGGTACT ACAGCAGTCA CAGTGATCAA GCAGGGACAT GATCTCCTGA 
TTGGAAACTT GGGGGATTCT AGAGCTGTCT TGGGAACT

Gene models with high sequence identity

AT3G02750.3 [+] show detail - Protein phosphatase 2C family protein
E-value: 4e-42; Score: 168.00

InterPro Scan Digest

Program	Description	E-value
superfamily	Protein phosphatase 2C-related	1e-21
HMMPfam	Protein phosphatase 2C, N-terminal	1.1e-06
HMMPanther	PROTEIN PHOSPHATASE 2C DELTA	4e-52
HMMPanther	Protein phosphatase 2C	4e-52
Gene3D	Protein phosphatase 2C-related	1.3e-19

See the detailed result >

AT3G02750.3

Model type: Protein coding
Short Description: Protein phosphatase 2C family protein
Computational Description: Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G36250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR