K09740

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K09740

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K09740

Determination of introduced cDNA(s)

  • J023128H01 - Rice Full-length cDNAs - Original: J023128H01

    full reading [+] show sequence

    Nucleotide sequence: J023128H01 - full reading 
    GAGTTAGTTA ATCCTCGAGA GAGTTTGCAA GATGTGGGGG GAGCTGGGGA 
    ACGCGGCAAC GGTGGCGCAG CTGGTCGGGG CGGACCTCGG GGGGCTCATC 
    TCCAAGATCA TCCAGGCGGC CGCGACGGCT CGCCGGAACA AGGCGGAGTG 
    CGAGCAGCTC GCCGTCCGCG CGTCCATGAT CTACGACCTG CTGCCGCACC 
    TGCAACACCC GGAGGTGGTG CGGCGGCCGG AGGTCCTGCG GCCGCTGGCC 
    TTGCTCGAGG ACACGCTCCG GGAGGCTCAC CAGCTCGTGA CTTGCTGCCA 
    GCACAAGGGC CCAACCTACC GGTTCGTGAT GGCGGGGCGG CTGGCTGACA 
    AGATCAGGAG CGTGCAGGCT AGGATCGACT CCTACCTCCT CTTCCTCCCG 
    CTCATCAGCC ACATCGACAT CATCCACTGC CTCGACCAGA TCCACAGAAT 
    GCTCATTTCA ACCGGCGACG GCGATTGCAG GACCATGGCA TCTCCCTCTG 
    CAGACTCCCA GTCCCTGCTT CAACGACGGC TGGTAGAGGA ATCGTAGATC 
    AAGCTAGCTA CCTCTTCCTT ATTTTTGATG AAACTCATCA CTACTCTGTG 
    CTTTTGTGTT ATTT

    Gene models with high sequence identity

    1. AT2G17780.4 [+] show detail - PLAC8 family protein
      E-value: 1e-19; Score: 93.20

     

    InterPro Scan Digest

    See the detailed result >

    AT2G17780.4

    Model type
    Protein coding
    Short Description
    PLAC8 family protein
    Computational Description
    mid1-complementing activity 2 (MCA2); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT4G35920.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR