K10018

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K10018

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K10018

Determination of introduced cDNA(s)

  • J023008J23 - Rice Full-length cDNAs - Original: J023008J23

    full reading [+] show sequence

    Nucleotide sequence: J023008J23 - full reading 
    GATTTTTCTC GTTCCCCTTT TCCTTCTCCC GTCACGGATC CGGGGGGCCG 
    GGCCACCGAT CCAAACGTAA ACCGAGCGCG CACACACACA CGCCACGCGC 
    CTCGCCGCCG ATGGCGACGG ATGCCGCCGA CGAGGCGCCG CTGCTCGCCG 
    AGGAGCCCCT CCGCCCCGGC GCCTGCAGCC GCGAGCTCGA GCTGCGGGAG 
    TTCCGCGACC GCTACGTGAT CCGCTCGGTC GACGGCGGCG GCGCCTTCGC 
    CGTCTCCCGC TCCAACGGCT CCCTCCGCCC CCTCTCCGCA GAGGAAGCGG 
    CTGCGGGAAG CGATTGTAGG GTGTCGAAGA TTTACGGAGT GGCTGGCGTG 
    ATCAGGTTGC TCGCCGGAAG CTATGTACTT GTCATCACTT CTCAAAGGGA 
    CGCTGGTTCA TATCAGGGAT CCCCTGTTTA CAATGTGAAC TCGATGAAAT 
    TCTTATGCTG CAACGAGGCT ATAAAGCATT TAACTGCACA AGAAAAAAGG 
    GATGAGGCAT ATTTCATGTC TCTCCTGAAA ATCGCAGAAA CTACTCATGG 
    GCTTTATTAC TCTTATGACA GGGATTTGAC ACTGAACTTG CAGAGGGCAT 
    CAAAGTTGCC TGCTGGGCGG GTACATAAGC CACTCTGGAA ACAGGCTGAC 
    CCACGTTTCG TTTGGAACAA AAATTTGCTA GAGGAGTTTA TTGAAGCAAA 
    ACTTGATGAA TTTATCATCC CACTGGTCCA AGGAAGTTTT CAGACAGCGC 
    AATTTTCCTT AAAGGAGGCA CCTGTCAGAA TAACGTTGTT CTCACGTAGA 
    TGCAACAGGC GTCTAGGAAC AAGAATGTGG AGGAGAGGTG CAAATCTTGA 
    AGGAGCCACA GCTAATTTTG TTGAGACAGA ACAGCTGGCA GAGTATGAAG 
    GTTTGATGTC TTCATTTATA CAGGTTCGAG GCTCCATTCC ACTTCTCTGG 
    GAGCAAATAG TGGATTTAAG CTACAAACCA TGTCTCAACA TAATTGAACA 
    TGAGGAAACG CCGAAGGTTG TCCAACGCCA CTTTCATGAT CTTTCACAAA 
    GATATGGGGA CACAGTTGTT GTTGATTTGA CAGATAAGCA AGGAGATGAA 
    GGAAATTTAA GCAATGCATT TGCTGCTGAA ATGGAGAGGA TTCCTAACAT 
    CAGGTATGTG CATTTTGATT TCCATCATAT CTGTCGTGGA GGGAACTTTG 
    ATAATCTGCA AGTTCTATAC AATCAAATTG AAGAAGCTAT TCAGAAACAA 
    GGATATTTTC TTATCAACTC CAAAGGAGAG ATATTCCTGG AGCAAAGCGG 
    CATAGTTAGA TCCAATTGCA TAGATTGTCT GGACCGTACA AATGTAACTC 
    AGAGCTTCCT TGCTAGAAAA TCGTTGGACT TACAGCTGCA GCGCATGGGG 
    GCTCTATCAT CATCTGGCAG CATTTCCCAA TCTGGAGACA TTAGTGACAC 
    CTTTAAAAAA ATGTGGGTTG AACATGGAGA TGAGCTAAGC CTGGAATATG 
    CTGGTTCTTA TGCACTAAAG GGGGACCTAG TGAGGTATGG AAGGCAGACA 
    TTACCTGGAT TGATTAAAGA TGGCATGAGT GCTCTTTCAC GATATTATTT 
    GAATAATTTT CATGACGGAG TGAGACAAGA TGCTCTAGAC CTTATCAGCG 
    GTTACTATAC AGTCAGCAAA GGCATCTCTT CTCCTTTTCA AAATGGTGGA 
    TTTGAATCTG CAACGTATCT TCCTGTGGCT TCAGCAATCA TAGTTGGTGG 
    GATTACTGCC ACCACATTCA CTCTTAGTCA AGTTGGACGG AATGCACAAC 
    ACTTCATCAC CTCCATTATC TGTGCGGGTT TGACGGCTGG AGTGGTAGCC 
    TTGGTGAAAG CAAATGGGAA GCAGTTTTGC TCTAAGCCTC GTTTGTGTGG 
    TCTCATATAA TTCTTTGTTT ATACCAATGA CACTAACATG AACCACCCCC 
    ACCCCTAAAT TTGTAATCCT TCTCAGAACT CAACGGAAAA AAGAACCTCA 
    GCAAGTAGTA CATCTATAAG AGCCAACTTG CCCTGTAGAC TAACACCTCA 
    AATTAAGCAG CCCCAAGTTC CTTTTTTTTT TCAGTATACA TTCTCAGTAG 
    ATCTTGTGAT GAGCCATGGA TACATGGTTG GTAATCATTC TCAATAGGTA 
    ATGAACGGCA GTTGGCCTTC TGATCCTGTA AACTGAAGTT AATCTGTAAC 
    GCCAGATTTC TTCCTATTAG TAATTGACTG CTTGGATGAT AGTATGCAAA 
    ACTGCAAATG TATGTTCTAA ATGAGTAGCT TACACGACCC AGAGTTCAG

    Gene models with high sequence identity

    1. AT3G51830.1 [+] show detail - SAC domain-containing protein 8
      E-value: 0; Score: 712.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Synaptojanin, N-terminal 5e-92
    ProfileScan Synaptojanin, N-terminal 71.901
    HMMPanther SUPPRESSOR OF ACTIN (SAC) 1.7e-160
    HMMPanther INOSITOL 5-PHOSPHATASE 1.7e-160

    See the detailed result >

    AT3G51830.1

    Model type
    Protein coding
    Short Description
    SAC domain-containing protein 8
    Curator Summary
    putative transmembrane protein G5p (AtG5) mRNA, complete
    Computational Description
    SAC domain-containing protein 8 (SAC8); CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT3G51460.1); Has 1752 Blast hits to 1640 proteins in 228 species: Archae - 0; Bacteria - 0; Metazoa - 573; Fungi - 577; Plants - 291; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR