K10111

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K10111

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K10111

Determination of introduced cDNA(s)

  • J033071J24 - Rice Full-length cDNAs - Original: J033071J24

    full reading [+] show sequence

    Nucleotide sequence: J033071J24 - full reading 
    GGAATGACAA AGCAAGGAGG TATCTGAGTA GCATGAGAAA GAAGGAGCCA 
    ATCCTATTTT CGCAGAAGTT TCCTAGTGCA GATCCTTTGG CGTTGGATCT 
    TCTACAAAAA CTATTAGCAT TCGATCCAAA GGACCGTCCA ACTGCCGAAG 
    AGGCATTGGC TCATCCATAC TTCAAAGGGC TCGCAAAAGT TGAGAGAGAA 
    CCATCCTGTC AACCTATCAC AAAAATGGAG TTTGAGTTTG AGCGTAGAAG 
    AGTGACAAAG GAAGATATAA GAGAGTTGAT ATTCCGTGAA ATACTGGAAT 
    ACCATCCACA ATTGCTCAAA GACTATATCA ATGGCACCGA GAGAACAACC 
    TTTCTATACC CAAGTGCTGT TGATCAATTT AGAAAGCAAT TTGCCCATCT 
    TGAAGAAAAT GGTGGAAATG GCCCGGTAAT TCCAATGGAT AGAAAGCACA 
    CTTCTCTTCC CAGGTCTACT ATTGTTCACT CAACTCCAAT TCCTGCCAAG 
    GAACAGCCCC GCATTGGCCC ATCAAGGGAT AAACCATCTG ATGAACCCTA 
    TAGCAATCCC CGGGAATTTG ACAGATTTTC TGGCAATGCC CCGAGGACCT 
    CACAAGCTCC ACAAAGAGTG CCAACAGCAA GACCAGGAAG AGTTGTTGGT 
    CCAGTATTGC CTTATGAAAA TGGTGCCACA AAGGATTCCT ATGACGCACG 
    GAGATTGGCA ATGAACTCAG GGTATCCTCC CCAGCAACAA ATACCTCAAG 
    CTTATGGTTA TTATCAGATA CCCGGTAAGT CAGCTTGTTC TGAGCTGTCG 
    CAGGCCGAAA GGTATACGCT GCACCAGCAG GCCTACACTT GCGCAAACAG 
    TGCCACTGTG ACTGATGTTG CTCTGGACAT GAGAGCACCC CCGTTCCATC 
    TATCAGGAGG GCCGAAAAGC GATTCGTCCG AAAGGTTAGC AGCAGAGACA 
    AACCTATACA CGAGATCTCT CAATGGCCTC GCTGCTACTG CTGCGGGAGT 
    GGCAGCAAGT GCGCACAGAA AGGTCGGTGT TGTTCCCTAC GGCATGTCGA 
    GGATGTATTA GTGCCCAACC ATGGCACATC CTGCATGCCC AATGGGAGCT 
    CTGATGCTAG CTTGCGGCGA AGCATTGGGA ACAAAGTGGC AGTTCAAGCT 
    AGTTTGGGCA CCAAGAGCAC AGGGCAATCC AAGGTTGACG ACGATGCCTA 
    AGAAGTTGCA TTGGTGCCCT GCTGCTCCTG TTCCTGCTTG ATCAGGAACC 
    ACCACCGGAG GTGTCAAAAG CTTTTCAACT CTCTATTCGC TTTAGGCAAA 
    TCAGCTTGTA TCTGCCTGTG TGTGTGTAAG AAAATGTGCC CTTCGTTGCA 
    CACTTGAAGG GGGTAGTCCA GTGGCTTGTA ATCTGAGCAT ATTTTAGGCG 
    CCAATTGTAT TTCTAGGGTG AGGGGACAAA AGGGAAAGGA AGGACCACTA 
    ACCTTTTCCT CTTTTTTTTT TCTTTTTCCA ATGTTGTATA GAGATGTTTC 
    TCATATCAAA AGTGCTACAT CAGAATGACT TGAGAAAGAT ATAAAGCAGA 
    CAATTGCGCG GTTT

    Gene models with high sequence identity

    1. AT2G42880.1 [+] show detail - MAP kinase 20
      E-value: 8e-79; Score: 291.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D no description 8.5e-08
    HMMPanther CELL DIVISION CONTROL PROTEIN 7 1.6e-06
    HMMPanther CASEIN KINASE-RELATED 1.6e-06
    superfamily Protein kinase-like domain 8.3e-10
    superfamily Protein kinase-like domain 5.6e-08

    See the detailed result >

    AT2G42880.1

    Model type
    Protein coding
    Short Description
    MAP kinase 20
    Curator Summary
    member of MAP Kinase
    Computational Description
    MAP kinase 20 (MPK20); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAP kinase 19 (TAIR:AT3G14720.1); Has 119531 Blast hits to 118315 proteins in 3667 species: Archae - 102; Bacteria - 13281; Metazoa - 43923; Fungi - 12334; Plants - 29390; Viruses - 579; Other Eukaryotes - 19922 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR