K10409

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K10409

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K10409

Determination of introduced cDNA(s)

  • J013000O04 - Rice Full-length cDNAs - Original: J013000O04

    full reading [+] show sequence

    Nucleotide sequence: J013000O04 - full reading 
    GACTTCTGCT CATTCCGAAG CCTTCGCCGC GTCTCGCCGG CGTACGCCGC 
    AGGCGCCCCA CCTCCTCCGG CGAGCCAGCT CGGAGCTAGA CGCCTGCCCT 
    CCCCACTCTC GCCGGCGGTG GGCGCGCGGG TGGAGCCCCT GCGTTGGCCG 
    GACGGCGGGA GGAGATGACG GTGGCGGCGG GGTTAGGGTA CGCGCTGGTC 
    GCGCTGGGCC CCGCCTTCTC CCTCTTCGCC GGCGTCGTCG CCAGGAAGCC 
    CTTCCTCGTC CTCACCCTTC TCACCAGCAC TTTATTCTGG CTTATAAGTT 
    TGATAATTCT CTCGGGAATA TGGAGGGTAT TTCTCCCTAT AAGATCAGGA 
    GCTTGGTGGC CGTATGCAAT TCTTATCCTT ACATCTGTTG CATTTCAAGA 
    AGGCATTCGT CTTGTCTTTT GGAGGCTTTA CAAGTAGGAA AATGGAAGAG 
    ATGCTGGATT CCTTTGCTGA TAGAATATCT AAACCGCGCC TCTGTTTGAC 
    AGACAAGATG CTAATATCGT TGGGTAAGTT CTTGCATCAC TAGATCAATA 
    TGTCCTTATT TCAAGATTGG CTTAATATTT CTCCATCCAT CGTTTATATA 
    GAAATTATTT CTCTATTTGG CTTGTGTTTG CCTTGAATTT TTATTTAAAA 
    TAGGTACCCA CTGATATCTT TACCGTCATT TCATTTCTGT GAAGAAATAC 
    ATATTTCATT TGGATATGGG ATGAATGGTA CCTCCATTTT TTTAGGTGGT 
    CTACAGTTGC AACTTTTTTC CACAAAAGGA ATTAAACTTT AACTTTGTAT 
    TATTCACAAC TCACAAATAT CCCGTAGGTT TCTATTTTCC TGATGTGTCA 
    TGGGCTTGGG CCCATTTCAA GGCAGGATGG CCTGTGTGGC TGTATCACGC 
    GATCAATATA CTTATTTACT ATTCACATGG CAACAAACGA CTTCACATCA 
    GTTGCCTTAG AGATAAGATT AGATTTGCTA ATCTGTTTCA TAGTAGTGAA 
    GTCATCCAAT CTTTATAAGG ATTGATTCTC TCTCTAATAT TCAAGCAAGG 
    AATAATCAAG GTCTTTAGTC TCCTTCCCTT TCTCTCTCTT CTCAACCAAG 
    TCTTAGTGCC TTGGTGGCAG CAATGGCCAA CCAATCAAGG GTGTCTCCTA 
    CCTTGCTCCT CATACGTTCA TACTTATATC CAACCAATGT CTTCAACATG 
    GAGTAATAAT TGCAAGCTGA CGTTCTAAAT TTTTTAGTTA GACTATCAAA 
    TTGACATTGA CTTTGATACA GATAAACAAA ACCGTACTTG TCCTGATTTT 
    CGTTAAAAAC TACTGAGTGT AAGTTTTCAA CACACTCTTC ATGTTCTTGT 
    TACATGGTGC ACTTAACATT TTGACATACT CTTCATATTC TTGTTACACA 
    GTGCACCTAA CAGTGGACAT AATTATAACT GCAAACGATA GGCTTTGCAG 
    TACATATATA GGTCATCTTG GACCATCCAG TTTTAAGTTC TTATTTCATA 
    GATTACATAA AAAAGTGCAA TATGTGGTAG GCATTAAGGA TTCTTAGTAA 
    AACAATTGCA GTGCTGAGTT GGTAAGGTTG GAAGATTCAC TGCAAAACTA 
    CCAAGCATTC TTTTAAATGG AGTATAGAAC AGAGCCAAGG CACACATATG 
    TGGTTCTTCA TCTTGTGATT CGAAACTAGA AAATAATCAA AACACAAACT 
    TGGTCTACGG TATTGGCTCA GCTGAATATT CTAAATGCAA ACTGTGCATT 
    CACTTATTGG TTAGTGTGAG CGTTTGTCCT TCATATCACT GTAAGTCAAA 
    AATGATAACT GCTATTGTTT GAACTTTGAA ATGTCTTTGC AGCTGGTGGT 
    TTAGGCCATG GAGTGGCTCA TGCCGTCTTT TTCTGCCTCA GCCTTTTAAC 
    TCCAGCATTC GGCAGAGCTA CATTTTATGT TGAAAAGTGC TCAAGGATGC 
    CATTTTTCCT TGTGTCAGCC ATTATTTCTC TTGGATTCTT GGTCATCCAC 
    ACATTCTCAA TGATTATTGC TTTTAATGGG TACGACGAGA GAAAGAGAAG 
    TGATCAAGTA TTTGTCCCAG TTGTTCATCT GATTGCTTCT GTAATGACAC 
    TAATCAATCT TGCACCTGGG GGCTGCGTAA TTGGTACACC ACTATTATGC 
    GTCATGGGTG CAGTGACGTT GCAATACTGC TGGCAAATGG TATGGCGGAG 
    ATTATCTGAG CAGCAGCATC GGCAGTTTAG CAGCTAGTGC CTGGCAATGC 
    TCCTTACATG TATCTTCTCA TGTCCAATTT TAATAATCTT TTGTTTGGGG 
    TACTAGGGCA AGAAGTTGTA AACGTAGCGA ATTAGCGATT ATACCACTAG 
    TGGGATTCAC ATCTTATGAA AATTGCATGC AATTCAACGT CATGACTGAG 
    ACATTGAAGC CC

    Gene models with high sequence identity

    1. AT2G31440.1 [+] show detail - INVOLVED IN: positive regulation of catalytic activity, protein processing; LOCATED IN: integral ...
      E-value: 4e-38; Score: 157.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther Aph-1 1.9e-24
    HMMPanther Aph-1 6.6e-29
    HMMPfam Aph-1 6e-28
    HMMPfam Aph-1 1.8e-37

    See the detailed result >

    AT2G31440.1

    Model type
    Protein coding
    Computational Description
    INVOLVED IN: positive regulation of catalytic activity, protein processing; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aph-1 (InterPro:IPR009294); Has 268 Blast hits to 262 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 212; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR