K11033

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K11033

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K11033

Determination of introduced cDNA(s)

  • J033061I23 - Rice Full-length cDNAs - Original: J033061I23

    full reading [+] show sequence

    Nucleotide sequence: J033061I23 - full reading 
    GAGACTGATC GCCGCCTCCT GATTCCCGAA GCTCTCAACC TCACCGCTAC 
    GCCGGCCGCT GGCGTCGTCG CGCTCTTCTC GCCCCGGCCC GCGCGACCAG 
    ACAAGCACAG CGGCCAGCGG CCGCCACCGC CAGCCAAGCC AAGCCAAAGC 
    AGGCATGGGC TCCCTCTTCA TCAGGTTCCA AGAGGCTGTC AAAACACTGG 
    CTAAGAATCC GATGTTTGCT AACAATCGAT TGTTTGCTCG AGATCCAAGG 
    CATCTCCAAT TCGAAGCTGA CGTAAATCGC CTGTTTCTCT ACACCAGCTA 
    TTACCGTTTG GGGGCTAATG CTGAAGAGAA GGACGCAGAG GAGATTATTG 
    ACATGGCTAG CAAAGCTTCT GTTTCTGAGC AGCAGAAGCA AGTACAGGAG 
    AATGTTCACT ATCAACTTAC AAATATGTGT CAAGCAATGG ATAGCATTCT 
    TCTTCCTGAT ACAAAAAATG GTGCTTCAGA AGCTAATAAT TATCCTCGAC 
    GTAGTGGGTT GAGTTTCGCT GTTGGCACAG GAGTTGCATC TGCAAACAAG 
    CCAGATGTCC CTTCTACTAG GCCTTTAAAT CGCGCTGAAT TGTCAAATAA 
    ATTTAGGGAT CACTTTCAAT ACACCCTTGA CATCAGGCCG TCACAAATCC 
    CTCACAAAGA TGCAGGGCAA GGTCTGTTCT TATCTGGAGA AACTAATGCT 
    GGTGCTGTCC TAGCCATCTA CCCTGGAGTT GTATATTCAC CTGCTTATTA 
    TCGATATATC CCTGGATACC CAAAAATCGA CGCGTGCAAC AACTATCTGA 
    TCACAAGGTA TGATGGAACA ATAATTGATG CCAAACCATG GCAATTAGGT 
    GGTGATAGCA GAGAAATATG GGATGGCTCA GATTTGGTGG ATTACAATGC 
    AGTGCCATCC AAAAGCCAAG AGAGCAACTC TGATAGGGCA TGGAGGATGC 
    TCAGCAAGCC TCTGAAGAAG GGTCACACTG AAAATTTTGG GGAAGTGCTT 
    GAACGACGAA ACCCACTCGC TTTTGGTCAC TTTGCAAACC ATCCACCAAA 
    AGGGTCAACT CCCAATGTCA TGATCTGCCC ATATGATTTT CCATTGACAG 
    AGAAGGACAT GAGAGTCTAC ATCCCTAACA TTACTTTTGG TGGTGAAGAA 
    GAGCCCGTTA CAATGAAACG ATTTGGTTCA TTCTGGTTCA AGTCTGGACG 
    TTCTGGTAAT CAGGAAGGGG AGTCTCCAGT TCTGAAGACT CTAGTGCTGG 
    TGAGTACAAG GTCCATATGT GATGAAGAGC TCTTCCTGAA CTACCGGTAC 
    AGCAACTCGA AGAAGCGACC AGAGTGGTAT ATCCCAGTTG ATGAAGAAGA 
    GGATAAGAGA CGATGGAGCT AGTTTTGCAC ATCTTAGCTG TGAGCCTGTA 
    ACAATTCTTC CTGCATTGCT TTCTAACAAT TATTTTTGTC CCGGTGTCGA 
    TCGGCAAATT GCAACTGGGA GTGATTTAGC TTCTGAAGTG AGATGGCAAT 
    TTTATTATGC TCATCTGGAG TCCTTGATCT TAATTACCAT TTTGGTAGAG 
    TGCCTGTTCT ATACTCTTCT CACAAGGCTT TTGTAATGCA TAAAAAATAT 
    GAGTACCAAA CTACCAGTTA CATGGTCATT AGTCCTGGGA ACTATGTGTT 
    CTTAATCCCA ATATTCTTAC GGGGAAATAA TTCATCAATG GTTATGGATA 
    TATCATTACG GTTGCTAAAT AAGTACTATC ATATGGTTGT GCATAGAAAA 
    GGGAATCCTG

    Gene models with high sequence identity

    1. AT5G23200.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08270.1); ...
      E-value: 2e-140; Score: 496.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G23200.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR