K11150

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K11150

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K11150

Determination of introduced cDNA(s)

J013092M02 - Rice Full-length cDNAs - Original: J013092M02

full reading [+] show sequence

GTCGAGTCTT ACAAACATTT CTTCTCCTCT CTCTCTCTCT CTCTCTCTCA 
ACTCCACCAC ATTTGTCTGT GTTCTTGCTG TCTCTTCTTC TCCTACTTCC 
TCTACTCGAT TCGAGGTTTG GCTGCTGCTG CTGTTGCTGC TGATAGTGGT 
GGTGGTGGGT GGGAGCAGAA GCAGAAGCAG GAGGCAAAGA AAATCTCGAG 
GAAGGAAGCA GAAGAAGCAG CCAAGAAACG CCGCCATCTC ATCTGGATGC 
GCTGAATCTA TCTGCCGCGG TGGAGGTTGT GGAATCATGG TTTCAAAGTC 
ATATACAAAT CTTCTAGATA TGAGTGGTGA AGATGTGTTT GACTTTCAGC 
AACCATTTAG ATCGCTTCCT CGTTTTGTGA CTTCCCCAAG CATCACATCT 
AATCCTGATT GGGATACAAG TAATGCTGAT GATTCAGTTG GTCCTGCATC 
TTGCTGTGTA AGGAAAATAA TCGTCTCCAA CTTTCTTCCA CTAAACTGTA 
CCAAAGATGA AGCTACTGGA CAGTGGTCCT TCTCAATGGA TGACAATCAA 
CTTCTTGTTC AACTTAAAGA TGGATTTCCA ATGGAGAGCG AAGTTGTTTA 
TGTGGGTAGC TTGAACGCTG AAGTTGATCC TGGTGAGCAA GATCAACTTT 
CACAGAAACT TTTCAGAGAA TACAAATGCA TACCTACTTT CCTCCCAGCT 
GACCTCCAGC AGCAGTTCTA TCATGGATTC TGTAAACAAC AATTATGGCC 
ACTTTTCCAT TATATGCTTC CTATTTGCCT CGACAAAGGC GAGCTCTTTG 
ACCGCTCTCT ATTTCAAGCC TATGTTCGGG CAAACAAAAT ATTTGGTGAC 
AAAGTTATGG AGGCCATCAA TTCAGATGAT GACTGTGTGT GGGTTCATGA 
TTATCACCTC ATGCTTCTCC CAACCTTTTT AAGAAAAAAG CTTCATCGCA 
TCAAAATTGG TTTCTTCCTT CACAGTCCAT TTCCCTCCTC TGAAATCTAT 
AGGACACTGC CAGTAAGAGA TGAAATTTTG AAGTCTCTTC TGAATGCTGA 
TCTCATTGGC TTTCAAACAT TTGACTATGC CCGCCACTTC CTTTCATGTT 
GCAGCAGATT GTTAGGCCTT AATTACGAGT CAAAACGTGG TCACATCGGT 
ATAGAGTACT TTGGCCGTAC GGTGAGCCTC AAGATCCTTG CTGTGGGTGT 
ACATGTTGGT CGTCTTGAGT CTGTGTTGAG GCTGCCTGCC ACAATTAGCA 
AGGTTCAAGA AATTGAGCAA AGATATAAGG GTAAGATGGT GATGTTGGGT 
GTAGATGATA TGGATATCTT CAAAGGGATC AGTCTAAAAT TGCTTGGCTT 
GGAATTTCTT TTGGAGAGAA CTCCAAAGCT AAGAGGGAAG GTTGTCCTTG 
TGCAGATTAT AAATCCTGCA AGAAGCACTG GAAAAGATGT GGAGGAAGCA 
ATAAATGAAG CCGTCTCTGT AGCTGAAAGG ATAAACATTA AGTATGGTTC 
TGCTGAGTAC AAGCCTGTCA TCCTTATCGA CTACCCCATA CCTTCTTATG 
AGAAGATTGC ATACTATGCT GCATCTGATT GCTGTATTGT AAATGCTGTG 
AGGGATGGGA TGAACTTGAT ACCATATGAG TATACTGTCT GCAGGCAGGG 
AAATGAGGAG ATTGATAAGC TCAGAGGTGT TGATAAGAGC TCACATCACA 
CAAGCACACT AATTGTGTCT GAGTTTGTTG GTTGCTCCCC ATCACTTAGT 
GGTGCTTTCA GGGTAAATCC TTGGAGTATT GAAGATGTAG CTGATGCATT 
ATATAAAGCA ATGGATTTGA CTCAATCGGA GAGG

Gene models with high sequence identity

AT1G60140.1 [+] show detail - trehalose phosphate synthase
E-value: 0; Score: 671.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Glycosyl transferase, family 20	5.9e-163
HMMPanther	TREHALOSE-6-PHOSPHATE SYNTHASE	1.3e-125
Gene3D	no description	3e-73
superfamily	UDP-Glycosyltransferase/glycogen phosphorylas	3.1e-132

See the detailed result >

AT1G60140.1

Model type: Protein coding
Short Description: trehalose phosphate synthase
Curator Summary: Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.
Computational Description: trehalose phosphate synthase (TPS10); FUNCTIONS IN: transferase activity, transferring glycosyl groups, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-phosphatase/synthase 9 (TAIR:AT1G23870.1); Has 4634 Blast hits to 4564 proteins in 1018 species: Archae - 52; Bacteria - 2697; Metazoa - 162; Fungi - 655; Plants - 601; Viruses - 0; Other Eukaryotes - 467 (source: NCBI BLink).
Link: InterPro Scan - TAIR