K15323

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K15323

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K15323

Determination of introduced cDNA(s)

  • J023016K03 - Rice Full-length cDNAs - Original: J023016K03

    full reading [+] show sequence

    Nucleotide sequence: J023016K03 - full reading 
    GGGTCGCCTC CCTCGCTCGC CGCCTCCCCC GCTTCCGCTC GCTCACCACC 
    ACCAACTCCT CCTCGTCTTC ATCAACGCGC TCGGTCGCCT CGCCTCGCTC 
    TGGAACGCAT GATGGCGAGC ATGGCGGCGC TGCTGCAGCG TCTGCTGGTG 
    GTGGTGAATC AGGTGGACCC GGGCGCGCCG GGGTTCTGGC GGGAGTTCTT 
    GGTGGGCATG CTGAAGCCGG TGGCGGCGAC GGCGGTGGTG GCGATGGCGG 
    TGGCGCTGAG CTTCACGCAG CGGCTGGGGC TCGAGGGCGA GATGCTGTAC 
    GCCATGGCGC GGGCGTTCCT CCAGCTCTCC GTCATCGGCT TCGTCCTCCA 
    GTTCATCTTC ACCCAGAAGA GCGCCGCCTG GATCCTCCTC GCCTACCTCT 
    TCATGGTCAC CGTCGCCGGC TACACCGCGG GGCAGCGCGC CCGCCACGTC 
    CCGCGGGGGA AGCACATCGC CGCCGTCTCC ATCCTCGCCG GCACCTCCGT 
    CACCATGGCC CTCCTCGTGG CGCTCCGGGT GTTCCCGTTC ACGCCGCGGT 
    ACATCATCCC GGTGGCCGGG ATGATGGTCG GGAACGCGAT GACGGTGACC 
    GGGGTGACGA TGAAGAAGCT GAGGGAGGAC GTGGGGATGC AGCGAGGGGT 
    GGTGGAGACG GCGCTGGCGC TGGGCGCGAC GCCGCGGCAG GCGACGGCGC 
    GGCAGGTGAG GAGGTCGCTG GTGATCGCGC TGTCGCCGGT GATCGACAAC 
    GCCAAGACGG TGGGGCTGAT CGCGCTGCCG GGCGCCATGA CCGGCCTCAT 
    CATGGGCGGC GCGTCGCCGC TGGAGGCCAT CCAGCTGCAG ATCGTGGTGA 
    TGAACATGCT CATGGGCGCT TCCACCGTCA GCAGCATCCT CTCCACCTAC 
    CTCTGCTGGC CGGCCTTCTT CACCGGCGCC TTCCAGCTCA ACGACGCCGT 
    CTTCGCCGCC GACTAATCTT CCCTCTTCCA CAACACCTTG CATTTTGATT 
    CATTATGGAT TACTGCTTAG TGATTAGTAG TAGTAGTAAT TAGTTGTTGA 
    GTACTTACTT AGTAGGACGA GAGAGAAAGT AAGAGTGTGT ATGTCTTGAG 
    GTTAATTTCT TCTTCCATAA TAAATCATGT GTTGATGACT T

    Gene models with high sequence identity

    1. AT2G37330.1 [+] show detail - aluminum sensitive 3
      E-value: 2e-104; Score: 375.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Conserved hypothetical protein CHP00245 3.8e-58
    HMMTigr Conserved hypothetical protein CHP00245 1.3e-56

    See the detailed result >

    AT2G37330.1

    Model type
    Protein coding
    Short Description
    aluminum sensitive 3
    Curator Summary
    Encodes an ABC transporter-like protein, without an ATPase domain, required for aluminum (Al) resistance/tolerance and may function to redistribute accumulated Al away from sensitive tissues in order to protect the growing root from the toxic effects of Al.
    Computational Description
    ALUMINUM SENSITIVE 3 (ALS3); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00245 (InterPro:IPR005226); Has 1906 Blast hits to 1906 proteins in 934 species: Archae - 39; Bacteria - 1722; Metazoa - 0; Fungi - 12; Plants - 43; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR