K15704

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K15704

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K15704

Determination of introduced cDNA(s)

J033050J21 - Rice Full-length cDNAs - Original: J033050J21

full reading [+] show sequence

GACGTACTAT GCTAGACTAG ACAACACCCA AAGGCAAAGA GAGGGAGGGA 
ATCATCTGCT CACACCAACC GAACTCGCAA CCTAAACACC TCCCTCTTCG 
ATTCACTTCA TCTTCCTCTT CTCTTCTCGT CTCTTGTAGT AGTATATATT 
TATAAAGCCC CCAAACAAAA GAGAAGACAA CTGAATTAGT TCGATCGATG 
CAGGCAGGCA GGCCTTCTAG TTCTACAAAG ATGCCTCTAA TGGATCGTTT 
TCCTTTCCTA TCGATGGCTT GATTGATACA AAGCCGGTTT TTTCACTCCT 
CGGGCGTGCG TTTCTTGACA CCGGCCGGAT TGATCTATCA TCCATCCATC 
GAGTCGAGTC GAGATCGATC TTGATCTCGA TCTCGATCGA TGGAGAAAGC 
CAAGATGGGA GACGTTGCCA CCATCCGAGC CGTTCTGGCG ATCCTCCAAT 
GGTGGGGCTT CAACGTCACC GTCATCATCA TGAACAAATG GATCTTCCAG 
AAATTGGAGT TCAAGTTCCC TCTTACTGTC TCGTGTGTCC ACTTTATATG 
CTCTTCGATT GGAGCTTACA TCGCAATCAA AATTCTCAAG ATGAAACCAC 
TGATTGAAGT TGCCCCAGAG GATCGGTGGA GAAGAATATT CCCAATGTCA 
TTTGTGTTCT GCATAAACAT TGTACTGGGA AATGTCAGCC TGAGATATAT 
TCCAGTCTCC TTCATGCAGA CCATAAAATC TTTCACCCCT GCAACGACAG 
TTATTCTGCA GTGGTTGGTC TGGAGGAAGT ATTTCGAGTG GCGCATATGG 
GCTTCTCTGG TACCAATAGT GGGAGGAATC ATGTTAACAT CAATAACTGA 
GCTTAGTTTC AACATGTTTG GTTTTTGTGC TGCTATGGTT GGTTGCCTGG 
CAACATCTAC CAAGACCATC CTTGCAGAGT CTCTACTCCA TGGATACAAA 
TTTGATAGCA TTAACACTGT GTACTACATG GCGCCATTTG CAACCATGAT 
ACTGTCAGTA CCAGCGATTG TGCTGGAAGG GAGTGGCGTC ATCAATTGGC 
TCTACACGTA TGATTCCATC GTCCCTGCAC TGATCATCAT CACCACCTCC 
GGAGTACTCG CATTTTGCCT CAACTTCTCC ATCTTCTACG TCATCCATTC 
CACAACGGCT GTCACCTTTA ACGTAGCCGG CAACCTGAAA GTTGCTGTGG 
CTGTGTTGGT GTCGTGGATG ATCTTCCGGA ACCCGATCTC CTCGATGAAC 
GCTGTCGGGT GCGCAATCAC GCTCGTCGGC TGCACCTTCT ATGGCTATGT 
GAGGCATCTC ATCTCGCAGC AGAGCGTTAA TTCGAGCCCA CGCACGCCGA 
GGAGCCGGAT GGAGATGCTT CCCCTCGTAG GAGACAAGCA AGAGAAGATT 
TAATTGGCCA CCAAATTAAA ACAAGTTGAT ACTCAAAAGA GGAGGGAATT 
GTTGGTGCAT GATCAATAGG AATAAAGGAG CATCATCTAA CAGCTTTCAG 
GATTAATCCT GAGGCACTTT TGTCATAGAA AATTATTCAG AGTTTTCAGT 
TGAGTTGTTC GTATAGAGCT AATAGAACTT CCTTCTTGTC ATCTGAACAT 
GCTGGGGTGC TCCTCAGCTG TATCTCTCTC TCTCTCTCTC TTTCTATTCT 
TTTCTTCCTT TTTCTCACAG GATTAAAAGA TTTTTGTTTG CTCGT

Gene models with high sequence identity

AT1G77610.1 [+] show detail - EamA-like transporter family protein
E-value: 5e-162; Score: 568.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Protein of unknown function DUF250	2.8e-25
HMMPanther	SOLUTE CARRIER FAMILY 35	3.9e-91
superfamily	Multidrug resistance efflux transporter EmrE	1.2e-07
superfamily	Multidrug resistance efflux transporter EmrE	0.00045

See the detailed result >

AT1G77610.1

Model type: Protein coding
Short Description: EamA-like transporter family protein
Computational Description: EamA-like transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: golgi nucleotide sugar transporter 5 (TAIR:AT1G21870.1); Has 3475 Blast hits to 3470 proteins in 365 species: Archae - 2; Bacteria - 169; Metazoa - 728; Fungi - 565; Plants - 1539; Viruses - 0; Other Eukaryotes - 472 (source: NCBI BLink).
Link: InterPro Scan - TAIR