K15724

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K15724

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K15724

Determination of introduced cDNA(s)

J013043H09 - Rice Full-length cDNAs - Original: J013043H09

full reading [+] show sequence

GTGTTCACCT ATGGCCGGCC ATGGGACGCA AGAGATGGAG TGTTGCTTCG 
TAGTGCCCAG CGAGAAGACG CCGAAGCATG TCCTCTGGCT TTCTCCCCTC 
GACATCGTCT TGGCCAACAG AGGAGCCCTC ACCCCGCTCG TGCACTTCTA 
CCGCCGCCGC CATGATGCCG CCGGCGGCGG CGGCGGCTTC TTCGACGTGG 
GCAGGCTCAA GGAGGCTCTG GCCAAGGCGC TGGTGGCCTT CTACCCCCTC 
GCCGGCCGCT TCCGCGTCGG CGGCGACGGC CGGCCCGAGA TTGACTGCAA 
CGCCGATGGC GTCTTCTTTG CGGTGGCTCG GTCGGAGCTC GCCGTCGATG 
ACATCTTGAC TGATCTCAAG CCGTCGCCGG AGTTGAAGAG GCTGTTCATC 
CCCCGTACTG AGCCGCCGTC TGCCGTGCTC GCCGTACAGG TGACCTTCTT 
GAGATGGGGC GGTATAGTGT TAGGGACGGC GATGCACCAT GCCGCCGTCG 
ACGGCCATAG CATGTTCCAC TTCTTGCAAA CATGGGCTGC TTTCTGCCGG 
GACGGCGACG CCGCCGTGGT GGAGCTGCCC TGCCACGACC GCGCCCTCCT 
CCGCGCGCGC CCCCGGCTCG CCATCCACCC TGACGCCTCC TCCGTGTTCT 
GCCCCAAGCT AAACCTCCGT CCGCCGTCGG CGTCGGGCTC GGGCCTCATC 
TCCGCCAAGA TCTTCTCCAT CTCCAACGAC CAGATCGCCA CCCTCAAGCG 
GATCTGCGGC GGCGGCGCGA GCACCTTCAG CGCCGTGACC GCCCTTGTGT 
GGCAGTGCGC CTGCGTCGCA CGCCGGCCGC CGCTGTGCTC CCAGACGCTC 
GTCCGCTTCC CCGTGAACAT CCGCCGGCGC ATGAGGCCAC CCCTCCCGGA 
CCGCTACTTC GGCAACGCGC TCGTCGAGGT GTTCGCCGCC GCCGCGGTGG 
AGGACATCGT ATCGGGGACG CTGGCCGCCA TCGCCGCCCG AATTAAGGGC 
GTGATTGGCC GCCTAAACGA CGACGAGATG CTGCGGTCGG CGATCGACTA 
CAACGAGATG GCGGGGATGC CCGATCGTCC GGACAATGGC AGCCTGCCGG 
AGACGGAGCT GCGGGTGGTG AGCTGGCTGG GCATTCCGCT GTACGACGCG 
GTGGACTTCG GGTGGGGGAA GCCATGGGCG ATGTCCCGTG CGGAGTCATT 
GCGCGGAGGG TTCTTCTACG TGATGGACGG CGGGGCAGCG GATGGTGACG 
GCGGGGACGC CGCCGCCGTG CGGGTGCTCA TGTGTATGGA GGCTGCAAAT 
GTGGAGGAGT TCGAGCGATT GCTTCGTGCC AAGTTTGTGT ACCCGAGGAT 
TTGATTTAGC ATGTGTCGGT TGGCTTTGTT GGAGTCTCTC TTCTCTGTGT 
TGTGTAAGCG CATATTTATT GGGACTAGCT ACACAATTTA TGACAGAAAA 
TCCCACGTTG CATCTTGAAA TTCTAGACCG TTGGGTTGGC TTT

Gene models with high sequence identity

AT5G48930.1 [+] show detail - hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
E-value: 2e-43; Score: 174.00

InterPro Scan Digest

Program	Description	E-value
superfamily	CoA-dependent acyltransferases	1.3e-08
Gene3D	no description	2.3e-47
Gene3D	no description	4.2e-39
HMMPfam	Transferase	1e-78

See the detailed result >

AT5G48930.1

Model type: Protein coding
Short Description: hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
Curator Summary: At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth.
Computational Description: hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (HCT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G57840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR