K15846

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased size (PATO:0000587) (Seed::Shape::small)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K15846

Determination of introduced cDNA(s)

J013043F17 - Rice Full-length cDNAs - Original: J013043F17

full reading [+] show sequence

GACTTGAAAC AGGCGAAGAT GGCGCCACCG TGCGGCCGCG TGGTCCTCTT 
CCCGATGCCG TACCCGGGCC ACACCATCCC CATGTTCCAC CTCGCCGCCG 
TGCTCCGCTC CCGTGGCTTC TCCATCACCG TCCTCCACAC CGAGCTCAGA 
GCGCCGGACC CGGCGGCGCA TCCGCCGGAG TACCGCTTCG TGGCCGTGGC 
CGACGGCACC CCGCCCGAGC TCGTGGTGTC CGAGGACGCC GCGGCGGTCC 
TGACTTCGCT CAACGAGACC TGCGCCGCGC CGTTCGCGGA CCGGCTGGCC 
GCGCTGCTCG CCGAGGAGGG CGGCGTCCTG TGCGTAATCG CCGACGTGAT 
GTGGTACGCG CCGGCGGCGG CGGCGCCAGA GCTCGGCGTG CCGCTGATGC 
TGCTGATGAC GAGCAGCGCG TCGAGCTTCC GGACGTTCAT GGAGTACCCT 
CTTCTGCTTG AGAGGGGCTT CTTGCCTGTC GACGATGCCC AAAAGGACAC 
TCTAGTCGAC ATTCTCCCCC CTTTCCGAGT GAAGGATCTA CAGCGCATTG 
ACACGACAAA CCTCTACAGC TTCGCCAACG TGCTTGCCAA TGTAGTCGCC 
GCAGCGCGGC TGTCATCAGG GCTCATACTC AACACCTTCG ACTTCATCGA 
GGGTGACAAC ATTTGCAGGA TCCGCGACGA GCTCTCCATC CCTGTGTTTG 
CCATTGGTCC ACTCAACAAA CTCATACCAC TCGTCGGAAG AAGCAGCTTT 
CTTCCCCCAG ATTGTGATTG CCTGAGGTGG CTTGACACAC AAGCCCCTAG 
CTCTGTGTTG TTCGTGAGCT TCGGCACCAT GGCCACCATT GATGCTCAGG 
AGTTTCTGGA GGTGGCATGG GGCTTGGCTG GCACCAAGCT ACCATTTCTA 
TGGGTGGTTC GGCCAAGCCT TGTCCGTGGG TTACGGCTGC ATTCCAGTGA 
GCTCCCTAGT GATTTGCAGG AAGAGATCAA TGGTCGAGGC AGGATAGTCT 
CTTGGGCACC GCAAGAAAAG GTACTAGGTC ACCCTTCTGT CCGCGCATTC 
ATGACGCATA ATGGATGGAA CTCGACGATA GAGAGTATAT CTGAAGGCGT 
GCCGATGATA TGTAGGCCAT GTTTTGGAGA TCAGATGGGA AATGCGAGGT 
ATGTTTGTGC TGTTTGGAGG TTGGGTGTGG AGATGGAGGT AGGGAGTGTT 
CTGCAGAGGG CAAAAGTTCA AACTGCTGTT GAGAAATTAG TGAATGGGGA 
GGAAGGTCAA AATGTGAAAC AGAGAATGAG AAATCTGAGG ATAGAAGCTG 
AAAAATGTGT TAGTAAAGGA GGATCATCAG ACACCGGTCT ACGTAACTTA 
GTAGATTCGA TATTATCTTT TGGAAAATGT TGATTATCTG CACAGATATA 
ACGTAGTCAT GTCTTCGACT AATACTTGTA GCCTCTTTAA ATGCGGATGG 
TATTGAGAAG ATCATTAAAT GTTGTAATAT CTAGTTTTCA TCTACTACTA 
ATAACCAGGT TCAAAAATTG CCGAATAGAA TTTC

Gene models with high sequence identity

AT3G11340.1 [+] show detail - UDP-Glycosyltransferase superfamily protein
E-value: 1e-92; Score: 337.00

InterPro Scan Digest

Program	Description	E-value
superfamily	UDP-Glycosyltransferase/glycogen phosphorylas	2.2e-49
Gene3D	no description	3.3e-14
HMMPfam	UDP-glucuronosyl/UDP-glucosyltransferase	1.3e-34
HMMPanther	UDP-GLUCOSYLTRANSFERASE	9.5e-111
HMMPanther	UDP-glucuronosyl/UDP-glucosyltransferase	9.5e-111

See the detailed result >

AT3G11340.1

Model type: Protein coding
Short Description: UDP-Glycosyltransferase superfamily protein
Computational Description: UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 76C1 (TAIR:AT5G05870.1); Has 7583 Blast hits to 7530 proteins in 440 species: Archae - 0; Bacteria - 352; Metazoa - 2017; Fungi - 25; Plants - 5047; Viruses - 86; Other Eukaryotes - 56 (source: NCBI BLink).
Link: InterPro Scan - TAIR