K16549

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K16549

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K16549

Determination of introduced cDNA(s)

  • J023131E20 - Rice Full-length cDNAs - Original: J023131E20

    full reading [+] show sequence

    Nucleotide sequence: J023131E20 - full reading 
    GGTCTCGAGC TTTCCCACGA GCTCCCCGCC GCTGCTGCTC GCCCTAGGGG 
    CCCCGACGCT CCAGCGGTAA ACCCTACCTC CTCCTCCTCC TCCGTCGCCG 
    GGATGGGGTC CACCTCCTCG CCGTCCCCGC CGCCGCCGCC GATGATCGGG 
    AGGGCCGGGA ACCTCACCGT CTTCATCACG CCGCCGTCGC CGGCGAGCAC 
    GCCGCGCTCC TCGCGCCCGT CCGAGTCCCC TCGGTCGGGC TTCTCGACCC 
    CGGCGACGGC CCCGCGCACG GCCGCCTCGC CGTCGCCGCC GTCTCCGGCT 
    CCCTCGCCGC AGCAGCAGAG GGTGGCCAGC CCGCCGCCCA CGATCCCGGT 
    GAAGTTCTCC CCGCCTGCGG CTCCGGTGAA GGTCCCTCCT CCGCCTCCGG 
    TGCAGGTGCC CCCGCCGCAG TACGAGAAGG CCTCCGCGGG GGGCAAGCAC 
    GACGGATCGG CGTTTGGTTT CTTCTGGGAC GCCGTCGCGC GCGTGCAGGA 
    AGCCCACGCG AGCCTCGACG AGTACGTGGC GAACTGGTTT GGGCTGGATC 
    AATCCAAGTA CCAATGGGCT CTCAACGACT ACTACGAGAG CACCGGCAAG 
    GAAGTGGAGT GTGGCAAAGC TGGCAAGCCA AAGGAGCTTA CTACTAGCAA 
    AGTGCAGAAA GTTTAGAAGG TCTGTTCACA TGATAAAACC AGCAGTTCTT 
    TTCTGGAATT ACGCTGAGGA GCATTTTGCA GCGACTTCTT TCTGGGTTGA 
    ATGTGTAGCT AAGCAAATGT GTGGAGAAGT TCGATTTGTT AGATCTTGGG 
    GGCGTAAAGG TGGTTGTCTG TTTTTCAACT GCATGGAGTC TCTTGGCAGG 
    TTTACGGGCT GCGCTGGAAG GGAATTGAGA CTGCTAGGCG TTTTGTTCAC 
    TCCTGCCAGG ATCTCTATTG TAATCCTATG TTATGACAAA ATTGCATATT 
    CGCAATGCCT

    Gene models with high sequence identity

    1. AT2G18910.1 [+] show detail - hydroxyproline-rich glycoprotein family protein
      E-value: 3e-15; Score: 79.70

     

    InterPro Scan Digest

    See the detailed result >

    AT2G18910.1

    Model type
    Protein coding
    Short Description
    hydroxyproline-rich glycoprotein family protein
    Computational Description
    hydroxyproline-rich glycoprotein family protein; Has 87 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 2; Other Eukaryotes - 4 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR