K17913

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K17913

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K17913

Determination of introduced cDNA(s)

  • J013027D06 - Rice Full-length cDNAs - Original: J013027D06

    full reading [+] show sequence

    Nucleotide sequence: J013027D06 - full reading 
    GAACGATGTG GGCTCCGGCC TCATCGCCAA CAATCCTCGC GGCGTTCGGT 
    CTCGTCGGCC TCGTCCTCGC GTGGCAGGCC GGCCTCCAGC TCCACCGCCT 
    GTGGTGGCGG CCGCGGCGGC TGGAGAAGGC GCTGCGGGCG CGGGGCCTCC 
    GCGGCTCGCG CTACCGCTTC CTCACCGGCG ACCTCGCGGA GGAGGGCCGG 
    CGGAGGAAGG AGGCCTGGGC GAGGCCGCTG CCGCTGCGGT GCCACGACAT 
    CGCGCCGCGC GTCGAGCCGT TCCTCCACGG CGCCGTCGGC GTCGGGGCGG 
    CGCACGGCAA GCCGCGCATC ACCTGGTTCG GCCCGACGCC GGAGGTGCAC 
    GTCGCCGATC CCGAGCTGGC CAGGGTCGTC CTGTCCAACA AGTTCGGCCA 
    CTTCGAGAAG GTCAGTTTCC CGGAGCTATC GAAGCTGATC CCCCAAGGCC 
    TGTCCGCCCA CGAGGGCGAG AAGTGGGCCA AGCACAGGAG GATCCTCAAC 
    CCGGTTTTCC AGCTCGAGAA GCTCAAGCTC ATGCTGCCGG TGTTTTCAGC 
    ATGCTGCGAG GAGCTGATCA GCAGGTGGAT GGGGTCCATT GGTTCGGATG 
    GCTCGTACGA GGTGGATTGC TGGCCGGAGT TCAAGAGCCT CACTGGAGAT 
    GTCATCTCGC GCACCGCGTT CGGAAGCAGC TATCTTGAAG GAAGAAGGAT 
    CTTCGAGCTG CAGGGCGAGC TATTTGAGCG TGTCATCAAA TCCATCCAGA 
    AGATGTTCAT CCCGGGTTAC ATGTATTTGC CTACTGAGAA CAACCGGAAG 
    ATGCATCAAA TGAATAAAGA GATCGAATCG ATTCTGAGGG GTATGATTGG 
    GAAAAGAATG CAAGCTATGA AAGAAGGTGA AAGCACAAAA GATGATTTAC 
    TTGGTATATT GCTTGAGTCA AACACGAGAC ACATGGAAGT GAATGGTCAA 
    TCAAACCAAG GCTTGACAAT CAAGGATATC ATGGAGGAAT GCAAGCTATT 
    CTACTTTGCA GGAGCGGATA CAACATCAGT GCTTCTCACA TGGACCATGC 
    TGCTATTAAG CATGCACCCC GAGTGGCAGG ATCGTGCAAG GGAAGAGATC 
    TTAGGACTAT TTGGGAAGAA TAAACCAGAC TATGATGGCC TGAGCCGCCT 
    CAAAATTGTT AGTATCTTGT AGGATTTAAT TGATAATACC ATTTCATTCA 
    TATGAGTTCA G

    Gene models with high sequence identity

    1. AT3G14690.1 [+] show detail - cytochrome P450, family 72, subfamily A, polypeptide 15
      E-value: 2e-94; Score: 343.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Cytochrome P450 1.4e-37
    superfamily Cytochrome P450 2.1e-56
    FPrintScan Cytochrome P450, E-class, group I 1.1e-06
    FPrintScan Cytochrome P450, E-class, group I 1.1e-06
    FPrintScan Cytochrome P450, E-class, group I 1.1e-06
    Gene3D Cytochrome P450 2.4e-50
    HMMPanther CYTOCHROME P450, SUBFAMILY 72 4.6e-150
    HMMPanther Cytochrome P450 4.6e-150

    See the detailed result >

    AT3G14690.1

    Model type
    Protein coding
    Short Description
    cytochrome P450, family 72, subfamily A, polypeptide 15
    Curator Summary
    putative cytochrome P450
    Computational Description
    "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR