K18807

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K18807

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
fruit (PO:0009001)
  • abnormal (PATO:0000460)
    (Silique::Others)
stem (PO:0009047)
  • abnormal (PATO:0000460)
    (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K18807

Determination of introduced cDNA(s)

  • J023110I24 - Rice Full-length cDNAs - Original: J023110I24

    full reading [+] show sequence

    Nucleotide sequence: J023110I24 - full reading 
    GGCTTGTACC TATCCTCCAC CACCACCAGC AGCGAGTCAT GGCGGCCATG 
    GCGATGGTGT CCGTGCAACT CACAGTCGCG GCGAGGCCCC TGCGCTCCCG 
    CCGCGCGCTC TCCGTCTTCA CCTGCGCCGC ACCCCCGAGG CAGCGGCCTC 
    CTCCAGGCCC AACCAAGCAC CGCCGCCTCC GCCACGACGC CGACGCGCAG 
    CCTCCCAGGA AGCGAGGTCA TCCTCCTCCT CCTCCTCCCA GGCGCACCCG 
    CACCCGGGGC CCTCCCGCTC GCCCCCAACA ATCCTACACT GACGACGACG 
    AGGAAGAGGA CGACCAAGAC GAGGAGGAGG GGAGCTTCGG TGGGGGCACC 
    CGGGCTGCCG CCATGCCCAA GCCGCCAGCG GGCTTCGTGC TGGACGACCA 
    GGGAAGGTGC ATCGCCGCCG CCTCCAAGCG CATCGTCACC ATCATTGATG 
    ACACCAACAA CCGGCCCTTG GAGTGCATCA TCAGGAGGGT GTTCCGAAGC 
    ACGCTAGACC ACGACTGCAT GCTCCTTTGC CCAGTTGACA TGCCTGTGCA 
    GGTCCTTAAG AGTGCCAATT TCAGTGGCTG GATTGCTGTT GATGATGACC 
    AGATTAAGGA AATCATTCCA TCCGTTGCAT ATGCCCTCGC TAGAGTGCAT 
    ATGCACTTTG TAGAGAGTGG ATTTTGTTAT ACAGCACGGG GTGGCTTTTG 
    CTTTCCTGAA GACGCGATTC AAGAATTTCA TGATTCTGGT GACGGCGGTG 
    ATAGTGTACC TTTTGAAGGT GTAGAGATTT GTTGTTTCAA TTTGGATGGC 
    GCACATTATA TGATTTATAC ACCAGTTGAT CCTCTTCTGT TCGTTGCAGT 
    GAAGGATAAA GATGGCGTGC TACGCATTGC TGAAGATGAA CTCATGGACG 
    ACCCTGCTGT TGTCGGTGCC ATAGACGAAG AGACAGAATT CACAGCTTTG 
    GTGGAGGAGG AAGAGGCCCT TCTTGAATCG GTGCTGGGTG AAAGATGACC 
    ATGCCGCGGC CTGTATTGAT GGTCGATCAG AGGCGGAGAC TGCAATGGTG 
    GGCGTCCATC GATCATCATT CCCACCCACC AATTAAGTAG CAGAAGCAAG 
    CTCCCCGCAA AAAAAAAAAA AAAAAAAAAA AAAAGAAGGT AGCAGAAGCA 
    AGCTAAGATA GACTGCGAGA AGATTTGTAC TACAACCAAC AATAGGGATA 
    TATATAGAAT GGAGCACTGT GATGTTAGAT GTGCAAAGTA GCTTGAACTA 
    GGGACTCATA TTAAGCTGCT TCTCTCCGAT GAAGCTTGCA AACTC

    Gene models with high sequence identity

    1. AT4G33480.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 2e-71; Score: 266.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G33480.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3727 (InterPro:IPR022203); Has 348 Blast hits to 348 proteins in 78 species: Archae - 0; Bacteria - 101; Metazoa - 0; Fungi - 0; Plants - 183; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR