K18949

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K18949

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K18949

Determination of introduced cDNA(s)

  • J013116M16 - Rice Full-length cDNAs - Original: J013116M16

    full reading [+] show sequence

    Nucleotide sequence: J013116M16 - full reading 
    TACGGGCGAG AGGATAAAAT AGGGAGAAAA AGGTCGCGAA AACAGCGTCA 
    ACCCTGCTCG CCGGCGCACC GACCGGCCAG AGCCGAAAAC TTCCACCACC 
    ACACCACAGC GTCAAAAGGC ACTCCAAAAT CCCACCCAAA AAAACCAATC 
    CCCAACCCCA ACCCCGGTGC CCGCCACGCC ACGCCGCGTT TGCGCTTGCA 
    CCGAGTGCGC CCGAAACCCA CCAACCAACC CGGCGGCACA GCACCGCAGT 
    TTCACGGTTG GTTTCACCGT TTCGTGCGTG TTTTTAGCGT GATCCTCCCG 
    GACCCGGAGG CCGGAAGCGA CAGGACAGAC AGGGACGAGG AGCTCTCGCT 
    ACAACTACTA CAACTGCAAG AGCTCGTTGG TTTTTTTTAA CCCCCACCGC 
    GTCCGCGACC CCGACCGATT TTTGCAGTGG TTCGCTCGCG ACGCCAACAC 
    GAACTCCCGA AGGCGAGGCG GCTTTGCACG CACGCACGCA CGCACGCACG 
    CGCGGCCTAC CTCCTCGGCG CGAGTTGCTC AGTCGCAGGG GGGGAGGTGG 
    GAGCGGGGCG GGGCGGGGCG GGCGTCCCGG TCGGGGATTG CGCTGGTTCG 
    ATCCCCCCGC GCGTGTGGGG GTGTGGGTGC GTGGGATCGA TCTCTCCCTC 
    TCGCTCGCTC GCTCGCGGGG CGTCGCATGC GGCGGCGCGG CGAGGCGAGG 
    CAAATGCGGG TGGATTCGTC GCTGGCGGTG GAGGAGAGGT GAGGGGGCGG 
    CGGCGGCGAT GGCGATGCAG ACGATGCAGA CGGAGCAGTA GCAGCAGCAG 
    CGGAGGAAGG GTTCGCCAGA GATGGATTTC TTCAGCGAAT ATGGTGATGC 
    TAACAGATAC AAAATACAGG AAGTCATTGG CAAAGGAAGC TATGGTGTAG 
    TTTGTTCAGC TATTGACCAA CATACTGGCG ACAAGGTTGC AATCAAGAAA 
    ATACACAATA TCTTTGAGCA CTTATCTGAT GCTGCCCGAA TCCTCCGTGA 
    GATCAAATTG CTCCGGCTAT TACGGCATCC TGATATAGTT GAGATCAAGC 
    ATATAATGCT ACCTCCATCA AGGAGGGACT TCAAGGACAT ATATGTTGTC 
    TTTGAGCTGA TGGATACCGA TCTCCACCAA GTCATCAAGG CAAATGATGA 
    CTTAACCAAA GAACATCATC AGTTCTTTCT TTATCAGATG CTTCGTGCTT 
    TGAAATATAT TCATACTGCT AATGTCTATC ATCGTGATTT GAAGCCAAAG 
    AACATATTGG CAAACGCTAA CTGTAAACTC AAAATATGCG ATTTCGGTCT 
    AGCACGAGTG GCATTTAATG ACACTCCTAC AACGGTATTC TGGACGGATT 
    ATGTTGCTAC TAGATGGTAT AGGGCTCCTG AGTTGTGTGG TTCTTTCTTT 
    ACTAAGTATT CACCAGCTAT TGACATATGG AGTATTGGCT GCATTTTTGC 
    TGAGATTTTA ACTGGGAAGC CTTTGTTTCC TGGTAAAAAT GTGGTTCACC 
    AGTTGGATCT GATGACTGAT CTCTTGGGTA CTCCATCAAT GGATACTGTT 
    ACAAGGATTC GGAATGAGAA AGCAAGGAGG TACTTGAGCA GTATGAGGAA 
    AAAGCAGCCA GTACCTTTTT CTGAGAGATT CCCAAAAGCA GATCCTGCTG 
    CACTCAAACT TCTGCAGAGG CTTTTAGCAT TCGACCCGAA GGATAGACCA 
    ACTGCCGAAG AGGCGTTGGC TGATCCATAT TTTAAAGGCC TTGCGAAAAC 
    AGAGAGAGAA CCATCATGCC AGCCAATAAC AAAGATGGAG TTTGAGTTTG 
    AGCGGAGAAA GGTGACTAAA GAGGATGTGA AGGAACTTAT ATTCCGTGAA 
    ATACTGGAGT ATCATCCTCA ACTTCTTAAG GATTACATGA ATGGAACCGA 
    AAAAACAAAC TTCCTATATC CTAGTGCCCT TGACAACTTT CGGAGACAAT 
    TTGCTAACCT GGAAGAAAAT GGAGGGAAGA ATGGAGATGC TGTTCCATCA 
    GACAGGAAAC ATGTTTCGCT CCCAAGGACT ACTACAGTTC ATTCTGCTCC 
    AATTCCTCCC AAAGATCATC AAAATATAAC TTCCCAAGTA CCCCAAAGGA 
    TTCCAGGTAG AACAGGACGA GGGGCTTGCC CTGTAATACC ATTTGAGAAT 
    TTGAGTGCAA TGGGCCCATA CAATCAACGA AGGGTGGTAA GGAATCCAGT 
    GCTTCCTCCA GCCACCACCA ACCTATCAGC ATATGCCTAC CACCGTAAAT 
    CGGATAGCTC AGAAAGAGAG CTCCAGCAGG AGCTTGAGAA AGATCGCATG 
    CGGTACCAGC CATCAGAGCA TTTCATGGAT GCTAAGGTGG TGTCACATAT 
    GTCCCATGAT TTGAGAGCTT CCTCTTACTA CGTTTCAAAG GCGAAATCTG 
    ATGTAGCAGA CAGAGCTGCC TTACAATCCA ACATGATGCA GGGAATTGGC 
    CCTTTTAATG GCATTGCTGC AGTTGGAGGT AACTACAATA AAGTCAGTAC 
    TGTTCAGTAT GGGGTCTCGA GGATGTATTA GGGTGCAATG GCCACTTCAA 
    AAATGCTCCG CTGAGCTGAT TAATAACATG AAAGAATCCA AGTACCCAAG 
    TGCCTTATCA GCCAAAGATT CAGACAAAGA ATACAGGACC AACAATCTGA 
    TCGAGGAAGC GTCGAGGCGG TGAAAATGAA ATTACAGAAT GTGGAAAAGA 
    CAAACATCTT GCTAGCCATT GATCTAGCCT GCCAAGAAAG GCATGCCATA 
    TTGCCGTGCC GTCAGTTATT TGCTGCTAAG AAGAAAAAGA AATGGGAGAA 
    AAGGGAAAAA GATGAGCGAG TGATCTACTT TGAATGAAAG AGAACTTATG 
    GGAATAAAAA TAGCGAGCTT ATGTATATAC AATAACTTGA TTCTATATAT 
    TACTGCCAGA GACAGCCATT TCTTTTGTTC CACATGTGGA CATGTGGTGG 
    TGTGTGTTTT CTTTTTGTAT CACTGGGCGT CTGAGCACAA ATGCTTGCGA 
    GACAATTCCC TTGTAGAACA GGAGTACATT TTGGTGTAAC ATAAAAAAGA 
    ACAAAAAAAA AAAAAATCTG AGGACTATAG TAAATGTT

    Gene models with high sequence identity

    1. AT2G42880.1 [+] show detail - MAP kinase 20
      E-value: 0; Score: 749.00

     

    InterPro Scan Digest

    Program Description E-value
    PatternScan Protein kinase, ATP binding site 0
    PatternScan MAP kinase, conserved site 0
    ProfileScan Protein kinase, catalytic domain 45.361
    HMMPfam Serine/threonine-protein kinase-like domain 4.7e-69
    HMMPanther MITOGEN-ACTIVATED PROTEIN KINASE 7 (ERK5)-REL 3.4e-179
    HMMPanther CDC2, MAP KINASE-RELATED 3.4e-179
    superfamily Protein kinase-like domain 5.2e-89
    Gene3D no description 1.6e-66
    HMMSmart Serine/threonine-protein kinase domain 5.3e-94
    HMMSmart Tyrosine-protein kinase, catalytic domain 6.5e-14

    See the detailed result >

    AT2G42880.1

    Model type
    Protein coding
    Short Description
    MAP kinase 20
    Curator Summary
    member of MAP Kinase
    Computational Description
    MAP kinase 20 (MPK20); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAP kinase 19 (TAIR:AT3G14720.1); Has 119531 Blast hits to 118315 proteins in 3667 species: Archae - 102; Bacteria - 13281; Metazoa - 43923; Fungi - 12334; Plants - 29390; Viruses - 579; Other Eukaryotes - 19922 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR