K19707

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K19707

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K19707

Determination of introduced cDNA(s)

  • J023131I21 - Rice Full-length cDNAs - Original: J023131I21

    full reading [+] show sequence

    Nucleotide sequence: J023131I21 - full reading 
    GACCCTCCCT CTCACCATTG CAAAGCCACT AGAGATCGAG AAGAAGAAGA 
    GGAGGAGGCG AGCTCCGTTT GGTGCGAGGC GCCGCCGCGC GCTGCGGGCC 
    TCTCCTCCTC CCCGCGCGCT CCACTCCACC ATGCTTCCGA GCCGGCAGAG 
    AAGCATCTTC CATCTCGGGG AGGAGGGTGG CGGCGCCGCC GACGCCGAGC 
    ACCTCGGCGC TGACCACGGC GACGGCCATG GCGATCACGG TATCATCAGT 
    ATCCACCAGC AGCGCCTTCG TGTCGTCGGG CTGCAGATCG TCCTCGCCCA 
    GACGAGGCAC CACCACCGCC AGCAGCACGG CCATGTCGTC CTCAAGCAGA 
    TGCAGATGGT GTCCCCGCCG CCGGCGGCGC GTCACCGGCG GCGGCGGCGT 
    CCTTGCGGTG ACTTCTTGAG CGCGTGCTCC CTGTGCAGGC TGGAGCTCGG 
    CCCCGACAAG GACGTGTACA TGTACAGGGG TGAACAGGGG TTCTGCAGCG 
    AGGAGTGCAG GTGGCAGCAG ATCATGACGG ACGAGGCGAG GGAGCGGGAC 
    GCCATGGCCA AGAAGGAGCG GCTAGGCCTG CATCATCGGA CGCCGCGGCC 
    GCCGCCGGCG GCGATCCGCG GCGGCTCGCC GAGGAGACTA CTCGCCGTAG 
    CCTAGCACGA GCGAAGTACA GTATGCTATA CTTGATGAGA CCGTGACCCA 
    TGCTTGGATG ATATATGATC AAAAGAAAAT TTTCTACTGT ACTCTCTGTA 
    AAATATGGAG AAATCGATGT AATTAAGAAA AACTTGATAA GGAGGAAGGA 
    GAGAGAGAGA GAGAGAGAGC CAGGTTTTGA GTAATTTGAG GCAAATTTGA 
    GGAAACGTAT ACGCATAACT GCATGCAGTT TCATATTTCA AATGAACACG 
    AAATGTTTGG TGGGGG

    Gene models with high sequence identity

    1. AT2G44670.1 [+] show detail - Protein of unknown function (DUF581)
      E-value: 5e-11; Score: 65.50

     

    InterPro Scan Digest

    See the detailed result >

    AT2G44670.1

    Model type
    Protein coding
    Short Description
    Protein of unknown function (DUF581)
    Computational Description
    Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT4G17670.1); Has 521 Blast hits to 521 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 521; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR