K20535

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K20535

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K20535

Determination of introduced cDNA(s)

J013014E16 - Rice Full-length cDNAs - Original: J013014E16

full reading [+] show sequence

GAGTCAGCTA TAGTGGCTTC TAACGCAAAC AAGCGAAGCG TCCGAAGAGA 
CGCGACGCGT GGCACAGTAC TCTAGCTAGC TACCGCCTCC CAAGGAAGAG 
GAGAAATCGA AGGCATCCAA CCATTCGTCA TGCATCTAGC TTCCACAAAC 
TTTCGATCGA TTTCACTACA AGAAGAACCC TAGTTAGTTA GCAAGTATAA 
TTAGCTCACT AGCTAGTACT AGCAGCCATG GTTGTTCAAT TGATGCTCTT 
CTTCCATGAC AAATTCATGG CTCCAATGGC AGAGGAGCCA CTGCCCTTCG 
TCCTCATCAT GATCATCATC TTGCCGCTGC TGGTGCTTCT TCACTACTAC 
CTGTCTGCAT CAACCAGAAG ATCATCGGCG GCGAGCAAGA GCAACGATGA 
TGTCCTGCCA CCGTCGCCTC CGAGGCTGCC GGTGATAGGC CACATGCACC 
TCGTCGGCTC CAACCCTCAC GTCTCCCTCC GCGACCTCGC CGAGAAGCAC 
GCCGCCGACG GCTTCATGCT CCTCCAGCTC GGCCAGGTGC GCAACCTCGT 
CGTCTCGTCC CCGCGCGCCG CCGAGGCCGT CCTCCGGGCT CACGACCACG 
TGTTCGCGTC GCGGCCGCGC TCCGCCATCG CCGACATCCT CGCCTATGGC 
TCCTCCAACA TCTCCTTCTC CCCCTACGGC GACTACTGGC GCAAGGCGAG 
GAAGCTCGTC GCCGCCCACT TGCTCAGCCC CAAGAAGGTC CAGTCGCTCC 
GCCGTGGCCG CGAGGAGGAG GTGGGCATCG CCGTCGCCAA GCTCCACGAG 
GCGGCGGCCG CGGGCGCCGC CGTCGACATG AGGGAGCTGC TCGGCTCCTT 
CACCAACGAC GTCCTGTGCC GCGCCGTGTG CGGGAAGTCG TCGTTCCGGC 
GAGAAGGCCG GAACAAGCTG TTCATGGAGC TCGCCGCCGG CAACGCTGAT 
CAGTACGCTG GCTTCAACCT GGAAGACTAC TTCCCGAGCT TGGCGAAGGT 
GGATCTGCTG AGGCGAGTGG TGAGCGCCGA CACCAAGAAG CTCAAAGAGA 
AGTGGGACAG TGTTCTTGGT GACATCGTAA GCGAGCATGA AAAGAAATCG 
TCGCTGCGTC GTGACGATCA AGTACAGATG GATGATGACC GTGATGATGA 
TCAGGAGGAG CAAGAGTCAG ATTTCGTTGA TATTCTGCTC GATCGTCAAC 
AGGAGTACAA TCTAACCAGG CACAATATCC ATGCCATATT GATGGTAATT 
AATCACTTAT ACATATGTTC TTCTGAATTT TTCTTTCTTT TTTACTATTA 
ATTCTATCAT CTAGATTAAT CGAAAATTAG GTAATTGAGT TTTGTACATG 
TGTTTCTTCC AAACAACGTT AATATAATAT ATATATTTTG AGTTG

Gene models with high sequence identity

AT3G48300.1 [+] show detail - cytochrome P450, family 71, subfamily A, polypeptide 23
E-value: 1e-33; Score: 141.00

InterPro Scan Digest

Program	Description	E-value
superfamily	Cytochrome P450	1.3e-42
HMMPfam	Cytochrome P450	1e-25
HMMPanther	CYTOCHROME P450, SUBFAMILY 71C	3.9e-117
HMMPanther	Cytochrome P450	3.9e-117
Gene3D	Cytochrome P450	1.7e-38

See the detailed result >

AT3G48300.1

Model type: Protein coding
Short Description: cytochrome P450, family 71, subfamily A, polypeptide 23
Curator Summary: putative cytochrome P450
Computational Description: "cytochrome P450, family 71, subfamily A, polypeptide 23" (CYP71A23); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 26 (TAIR:AT3G48270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR