K21043

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K21043

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21043

Determination of introduced cDNA(s)

J033044F12 - Rice Full-length cDNAs - Original: J033044F12

full reading [+] show sequence

GACCTGTCCG GCGGCGACAC ACACAATGGC ACAGCCACGC ACTCACGTCG 
TAGGCGGCCT CCGCGCCCTC CGAACCGCGA TCGTCTCGCC GTCGCCGGCG 
CCGCCCGCAG GCGAGCGCGC TCTACCTCTC ACCTTCCTGG ACGCGCAGTG 
GCTCAGCGCC CACCCCGTCG AGCGCGTCTT CTTCTACCGC CTCGGCCCCG 
GCGGCGACGA CGTCGACGCC GTGCTGTCCC GGCTGGTCGA GTCGCTGGCC 
CGGGCGCTCC ACGCCTTCTA CCCGCTCGCC GGCCGCGTCC GCCTCACGCC 
CGGCGAGACC AACCGGTACG AGCTCTTCTA CCAGCCCGGC GACGGCGTGG 
CGTTCACTGT CGCCGAGCAC GACGGCGTCG GCGTCGGCGT CGATGAGCTG 
GCGGACACGG ACGAGCCGAG GGAGGTTGCC AGGATTGCCA CGTTCGTCCC 
GGAGCTCCCG AAGGGCGGCG CGGTGCTCGC GTTGCAGGCC ACCGTGCTGC 
CGCCCGACCG CCGTGGCCTC GCTCTCGGCG TCACCGTCCA CCACTCCGCC 
TGCGATGGGG TGAGCTCGAC GCACTTCCTC CACACCTGGG CCGCCGCCTG 
CGCCGGCGAC CGGGTGCTCC CGGAGCCACC CGTCATTGAC CGCACGATCA 
TCCGCGACCG CAACGACATG TACGACGCGT TCGCCTCACC CGCGAGCGAA 
GCCAAACATG CGTTCGATTC GCCCGACGTC GCCGGCAAGC TCCTCGCCAC 
CTTCACTCTG TCGCGACAGC AGCTGCAGAA CGTCAAGGAC GCCGTCGCCG 
GCGAGGCCGC ACGTCGCGGC GTGGCGCCGC CGCGTTGCAC GTCGCTCGTC 
GCCACGCTCG GCCTCACGTG GCTGTGCTTC CGCCGCGCTG GGCCCGACGG 
CGAAGAAGGG CCTCGCGGTG ACGGCCGCGC CCACCTCGTC TTCCCCGTCG 
ACCACCGGTC GCGGCTGGAG CCCCGCGTCC CCGAAAAGTA CCTCGGCAAC 
TGCATCGGCC CGGGCTTTGC CACGGCACAC GAGACGGAGC TCGCCACCAC 
CACCACCACC GCCGATGGCC TCTTCACGGC TTGCGCCGCG GTCGCCGCCG 
GCATCGACGA GGCGGTGCGC GGCGAGCCGA CATACTGGGA GCGGTGGGTG 
GAGCGCATCA CCGAGGCGTG CGCGGACGAC ATGTCGCTGT CCGTGGCAGG 
ATCGACGAGG TTCGGCGTGT ACGACATGGA CTTCGGGTTC GGGAGGCCGG 
CGAAGGTGGA TGTCGTGTCC GTGGCGAAGA CCGACGCGAT GTCGGTGGCC 
GAGGACCGTT CCGGCTCCGG CGGCATCGAG GTGGGCATCG CTCTGTCGCC 
GGCGCGCATG GAGCGGTTCC GGAGGTGGCT CGCCGACGCC ATCGCCCTGC 
TCTCCTCGTC TTCCCACTGC AACTAGCTAG GGTGGAATCT GCAAAAATAA 
TTAAGTATTT TGCTTGAATT CTAGAACTTT GAATTTATTA CCCTAAAAAA 
TCTAATCCTT TGAATCTTTT GGTATC

Gene models with high sequence identity

AT5G39050.1 [+] show detail - HXXXD-type acyl-transferase family protein
E-value: 2e-41; Score: 167.00

InterPro Scan Digest

Program	Description	E-value
superfamily	CoA-dependent acyltransferases	8.4e-07
HMMPfam	Transferase	3.2e-48
Gene3D	no description	1.5e-40
Gene3D	no description	2.4e-36

See the detailed result >

AT5G39050.1

Model type: Protein coding
Short Description: HXXXD-type acyl-transferase family protein
Computational Description: HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G39080.1); Has 1994 Blast hits to 1978 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 30; Plants - 1963; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR