K22320

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased size (PATO:0000586) (Seed::Shape::large) increased length (PATO:0000573) (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K22320

Determination of introduced cDNA(s)

J033089K18 - Rice Full-length cDNAs - Original: J033089K18

full reading [+] show sequence

GATTCCTCCC AGATCCCCAA TCCTCCAATT CACCACTTCG ATTGATGCGC 
CAATGGTGCG CGAGCTCCGC CTCGACTCCT TCTACGCGCG CCTCCGCGCC 
GCCGCCGCCG CGTCCGCCGC CGACGCATCC TCGCCGCTCC TGATCCTCCC 
CTCCGCCGCC GACGCCGACG CCCTCTGCGC GCTCAAGGTG CTCACCCACG 
TCCTCTCCGC CGACTCCATC CGCTTCTCCA TCTACCCCGT CGCCTCCGCC 
GCCGCCGCCG CCTCCCTCCT CGCCTCCTTC TCCGCCTCCC ACCCGCTCTG 
CCTCCTCCTC ATCAACTGGG GCGCCCACCG CGACCTCCGC GCCGTGCTGC 
CCCCCGCCGC CACCGCGTTC GTCGTGGATT CGCACCGCCC CATCCACCTC 
CACAATCTCT CGGCGGCCAA CGACCGCGTC GTCGTGCTCT TCACCACGGA 
CGACGAGCAC ACCGCCGATC TCTCCTACGA CTTCGACGTC TCCTCCCTCG 
CCGACGCCTC CGACCTCTCC GCTCAGGGGG AGGCCGACGA CCACCTCCGC 
GTCGCCGAGG AGGACGAAGA CTCCGATGCT TCCGACTCGG ATTCCGATGG 
CGAGGGTGGG AGGAGGAAGA GGCGGCGGCT CTCCGACGAT GCGGAGGCGA 
ATGGCGACCC GGAGAGGCTG TTCGGGAAGC TGAGGAGGGA GTACTACCGG 
CTCGGCACCT TCCACGGGAA GCCGTCGGGG TGCCTCATGT ACGAGCTCGC 
CCACGCGCTG CGGAAGAACA CCAACGAGCT CCTATGGCTC GCCTGCGTCT 
CCCTCACCGA CCAGTTCGTC CACGAGCGCA TCACCAACGA GCGCTACCAG 
GCCGCCGTCA TGGAGCTCGA GCAGCACATC AATGGATCTG GCAATCTCGA 
CCCATCTGGC GTCGGCGCTG TGGTGACGCT CAAGGATGGC ACCAAGATCC 
GGGCGCCGGA GGCCTCACGC ATCGCTTATG AAGACGAGCC GCGGCTGATG 
CTGCTCCGGG AGTGGAGTCT GTTCGACTCC ATGCTCTGCT CGTCGTATGT 
CGCGACGAAG CTCAAGACCT GGAGCGACAA TGGCCTCAAG AAGCTCAAGT 
TGCTTCTGGC AAGGATGGGA TTCCCGCTCG CCGATTGCCA GAAGAGGTTC 
CAGTACATGA GCATGGAGGT CAAGCGGAAG ATGCGTGATG AGTTTGATCG 
GTTCTTGCCT GAGTATGGGC TCACCGAGTT CTATTACCGG AGTTTCTTGA 
GGGTGCATGG CTACCGCTCC AAGGTTTCTG CTGCAGATGT TGTTTATGGC 
GTCACAGCTT TGCTTGAATC ACTAAATGCC GAGTCCAAGG ACTCCAAGGG 
GTCTTCTGCT GCTGAGCAAT TCTGGGTTGC ATACTCGGCG TTGTCGCTGA 
GCAATGTCGA TCAGCTGCGG AAAGGGATGC AGTCTGCAAT TGAGATACAG 
AGGGCAATAC TGAGGCAAGG AAGCTCAGCG ATTACCAAGA CCGGGTTCAT 
TCGGAGTGCA AAGAAGTTTC GGTGGGTGAA GCTTGATGAT CCAGTGGATA 
CGGATAAGCT ATGCCAACCT CAGGCTCTTA CCAAGTTCTG CTTTTTCCTT 
ATGGACGCAC TGAGAGAGCG AGGAGCAAGG ATGAAGCCAC TTATCTGCGC 
TTGCTTAGCA AGGGAGCCTG AGAAAGTGCT TGTTGTGGGG GTATGTGGGA 
AGCCAAGGCT GGGGGCTGTT AAGGGGAATG CATTTGGTAA TGCATTTAGG 
TCAGCTGCCG AGGAGATTGG TGCAGACTAT TTCCATGACA TGTTTGAGTC 
ATCATGGATT GTTCTTGACG TTGTTGCTGT CAGCTCTTTC ATGATTCGGT 
TAACAGAGAA GCTATGATGA CATGTGTTTG TCTAGCGCTA ATGATTCTTT 
TCAGTCCCCA AAGAAGATGG GAGCTTGAAG CTGGATTCTC TCCCAAACTC 
TAAATAAAGG AGCTTGAGGG CTGGTGGAGT GATCGTTCAT GGCATGCTCT 
ATTTTTTCTG CTACCACATG ATCTTCACTA AGTTAGAGAT AGCAGCCGGG 
CAATGGCAAG CATTGCTTGA TTTTCAAAGT CTAGTAGTTC AACGGCTGAG 
TTTTATACTA TGTTATTGAA GGGAAGATTG TTTCCTCACT GTAACTGCTC 
CATTATTAGA AAATGATAGA TCAATAGATT CAGACACAAA CCTGATTCTG 
ACACACAAGG GGCAAGGTAT ATTTGCTTGC TGATTTTCTT TACTACTAGA 
TGAGCTTGAT GTTTGTATTT GTATTCGCAT AAGCTTGCAA TTTCTGTTGT 
AGAATAGTGT TGTAATCAAT TATGTATCAT TGCATTTACT TGATATTCTT 
TTTAAGTGT

Gene models with high sequence identity

AT3G25100.1 [+] show detail - cell division cycle 45
E-value: 0; Score: 713.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	CDC45-like protein	2.3e-136
HMMPanther	CDC45-like protein	5.8e-149
FPrintScan	PRICHEXTENSN	3.9e-09
FPrintScan	PRICHEXTENSN	3.9e-09
FPrintScan	PRICHEXTENSN	3.9e-09

See the detailed result >

AT3G25100.1

Model type: Protein coding
Short Description: cell division cycle 45
Curator Summary: Required for normal meiosis, may act in the last round of DNA replication prior to meiosis, sequence similar to yeast CDC45
Computational Description: cell division cycle 45 (CDC45); CONTAINS InterPro DOMAIN/s: CDC45-like protein (InterPro:IPR003874); Has 1810 Blast hits to 1657 proteins in 252 species: Archae - 0; Bacteria - 25; Metazoa - 666; Fungi - 449; Plants - 176; Viruses - 35; Other Eukaryotes - 459 (source: NCBI BLink).
Link: InterPro Scan - TAIR