K22909

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K22909

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K22909

Determination of introduced cDNA(s)

J023057H08 - Rice Full-length cDNAs - Original: J023057H08

full reading [+] show sequence

CTGATGAATA GAGAGGTGAA AACTGGAGAG AAACTCCCAA GCAACTCCCA 
AAGTCTCAAT CTGCTCAACG GACATGTTCC AATGATTCAC TTGTTCGTTA 
TTAATTGTTA CATTTTCTTT GTTTATATAT ACGCACATGT AAGGATGCAG 
GAAGACGATC GATCAAGGTT CACCTCGGAA AAGAAAAAAG AACAGAAAGA 
AAGACGATCT AGAGGGAGCC AAAGATTGCA AGATCGATCG CAAGGTAACG 
TACACGTACA GGTGAGAGGA ATCGATGCCG GCCGACGCGC GAGCTGCTCC 
GCCGTCGTGC CCGTTCCCGA CGATACGGTC GCATGGCGCC GCCGTGGCGA 
GGTCGCACGC CTACGACTGG CTCGCGCTGC TCCTCCTCGT CGCCGTCGAC 
GGCCTCCTCA ACGCCATCGA GCCGTTCCAC CGGTTCGTCG GCGCCGGCAT 
GATGACCGAT CTCAGATACC CCATGAAGCG CAACACCGTC CCCATCTGGG 
CCGTCCCGAT CGTCGCTGTC ATTGGGCCCA TGATTGTCTT CGCCGTCGTC 
TACTTCAGGA GGAGGAACGT GTACGATCTT CACCATGCTG TGCTAGGCAT 
TCTGTTTTCG GTGCTGATTA CCGGCGTGCT CACCGACGCG ATCAAGGATG 
CCGTCGGCCG CCCGAGGCCG AACTTCTTCT GGCGCTGCTT CCCCGACGGA 
ATCGCGGTGT TCGATAACGT CACCACGGGA GTCATCTGCC ACGGCGACGC 
GAGCGTGATC AAGGAGGGAC ACAAGAGCTT CCCGAGCGGC CACACTTCAT 
GGTCTTTCGC CGGTCTGGGG TTCCTGTCGT GGTACCTTGC CGGGAAGATC 
ACGGTGTTCG ACCGGCGCGG GCACGTCGCC AAGCTGTGCG TCGTCCTCGC 
GCCTCTGCTC GTTGCGGCGA TGGTCGCCAT CTCGAGGGTG GACGACTACT 
GGCACCATTG GCAAGACGTC TGCACGGGAG GCGTCCTTGG ATTGGTGGTT 
GCCTCTGTCT GCTATCTTCA GTTCTTCCCG GCTCCTTCAG ATGAGAAAGG 
GTTCTGGCCT CACGCGCACT TTAGGTACAT CACCGAGAGG GGAAGCGAGA 
ACCCAACGCA GCAAGCCACC GAACCACTGG ACGCCATGGA AACCGGTAGG 
GGAGGCCAAT GAACAAGGTG CAAGCAAGAC CAATCTTGTG TATATAAGGC 
CATAATGTAC AGCTCCTCCT CAAGGCACGG GAGGTAATCG TCGTTAGTTT 
GTAAATACTT TGGCGTGGGC CAATGGTACC GACTAACTTG ACTACTGACC 
TGACGCAAAT AGGTGTTGTT TGTACATACT GTATGTATTT TCAACGAAGT 
TTGTACATAT GTATTGGTTT TGCTTACTTA TGTACTCCTA TGTATTTTAA 
ATAATTTTAG TGTCTAAAAT TCCGTTCTTC TCCCAAGAAT GGCACGGGGT 
CAGATCAAGC TCTGTGTTAA GGCCTGAACT GGCCCATCCT ATTTGGGCTT 
GAATTCAAGA AATCATTGTG AAAAGAAATA AGTCTATTTT GTGTCCC

Gene models with high sequence identity

AT1G15080.1 [+] show detail - lipid phosphate phosphatase 2
E-value: 1e-88; Score: 323.00

InterPro Scan Digest

Program	Description	E-value
Gene3D	Phosphatidic acid phosphatase/chloroperoxidase, N-terminal	4.2e-05
HMMSmart	Phosphatidic acid phosphatase type 2/haloperoxidase	3.7e-20
superfamily	Phosphatidic acid phosphatase type 2/haloperoxidase	6.6e-39
HMMPfam	Phosphatidic acid phosphatase type 2/haloperoxidase	4.8e-25
HMMPanther	PHOSPHATIDIC ACID PHOSPHATASE	8e-117
HMMPanther	LIPID PHOSPHATE PHOSPHATASE-RELATED	8e-117

See the detailed result >

AT1G15080.1

Model type: Protein coding
Short Description: lipid phosphate phosphatase 2
Curator Summary: Encodes phosphatidic acid phosphatase. Involved in ABA signaling. Functions as a negative regulator upstream of ABI4. Expressed during germination and seed development. Expressed overall in young seedlings, in roots, hypocotyls, and vascular cells of cotyledons and leaves of 10 day-old seedlings, in flower filaments and stem elongation zones. Not expressed in anthers, pollen nor petals.
Computational Description: lipid phosphate phosphatase 2 (LPP2); FUNCTIONS IN: acid phosphatase activity, phosphatidate phosphatase activity; INVOLVED IN: abscisic acid mediated signaling pathway; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.5); Has 2086 Blast hits to 2081 proteins in 377 species: Archae - 13; Bacteria - 320; Metazoa - 928; Fungi - 399; Plants - 199; Viruses - 3; Other Eukaryotes - 224 (source: NCBI BLink).
Link: InterPro Scan - TAIR