K24021

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K24021

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K24021

Determination of introduced cDNA(s)

  • J023007E18 - Rice Full-length cDNAs - Original: J023007E18

    full reading [+] show sequence

    Nucleotide sequence: J023007E18 - full reading 
    GACCGGTTCG GGCTCGAGCC GCAGCCGCCA ACGTCCCAAG CGACCGAGCC 
    AAGCGCGTCA CCCGCCACAC TGTCACAGAC GCGACGCGCT CCCGCTCCCC 
    GACGATGCCG GCGGCGGCGG CGCTGTCCGA CGACGACCGC CTGGTCGTCG 
    CCCACTGCGC CGCGCTCTCC TTCCCACCCG CCTCCCAGCC GCCGCCCCCT 
    CCCACCACCT CCTCCTCCTC CTCGGGCGCC GGCGCGGGCG CCTCCTTCCA 
    GGTGCACCAC GCGTCCCACC CGTACCCCTG CGCCGCCTTC GCGTTCCCGC 
    CCTCCTGGTC CGCCGCGCCC GGCTGGGCCG CCGCGGGGCG CGCGGCGTTC 
    GGGGACGCGG AGGTGGACCC GTCCCTCTTC CCGTCGCTCC GCAGCGTCGG 
    GAGCGGCGTC CCCGCGCGCG CCAACGCCGC GTTCCTCGCC TCCTTCGGCG 
    CCCTCCTCGA CGGCTCGCCG CTCCAGTCCG AGGTATCTAG AGCTGTGGCA 
    GAAGAGAAGC GTATTGTATT CACAGGCCAT TCATCAGGGG GTTCAATAGC 
    TACCCTTGCT GCCATATGGT TTCTTGAGAC CTGCACCAGG AGAGGCAGTG 
    TTAATCAGGC ACACCCATTT TGTGTAACCT TTGGGGCTCC TCTTGTTGGA 
    GACAATACCT TTAACAATGC TGTTCGAAGG GAGGGCTGGT CACAGTGTAT 
    TTTGAATTTT GTCGTGCCAG TAGACATCAT CCCCCGCATA CCACTTACTC 
    CGCTTGCATC TGCCACAGAA GGAATTCAAG CTGTTCTGGA TTGGTTATCC 
    CCTCAAACTC CGAACTTCTC GCCTTCTGGG ATGCCACTCA TCATAAGTCA 
    GTTTTATGAA AATTTACTGA GAAGCACACT TTCTATTGCG AGCTATGAGG 
    CCTGTTCCTT CATGGGATGC ACTAGCTCGA TCTTAGGAAC ATTGACTTCC 
    TTCATTGAGC TCTCCCCTTA CAGACCCTGT GGGACTTATC TTTTCTTGAC 
    AAGCAGTGAA CAGCTGGCCG TTCTGACAAA TTCAGATGCT GTATTGCAGT 
    TGCTATTTTA CTGCCTTCAG TTGGATCCCC AGCAACAATT GCGTGATGCT 
    GCTGAGAGAA GTTTAAGTGC TCATTGGCAA TATGAACCAA TTAAGCAAAG 
    CATGATGCAA GAGATAGTTT GCGTGGATTA CTTGGGAGTG GTTTCATCAA 
    CACTTCCTGG TAGGCAGATG AGTAGCACAA TAGTTGGAGG CCTTGAACTG 
    AGCAAGGAAG CTATGTTGAG CCTTTCTGCA GCTGGACAAT GGGAGAAGCA 
    AAGGGAGACA AACCAGGCAA AAATAGATGG TGCAAGCTGC ACCAAAATTA 
    GGGAAGCCCT CAAGTCTCTG AACGAGTACA AAAGGACATG TGAACTCCAT 
    GAAGTGAGCT ACTATGATTC CTTCAAGCTT CAGCGTGAAG TACATGACTT 
    TAATGCAAAT GTTAGCAGGT TGGAACTAGC TGGACTCTGG GATGAGATAG 
    TTGAAATGCT GCGAAGGCGT GAGCTGCCAG ATGGTTTCGA AAGCCGACAA 
    GATTGGGTGA ATCTAGGAAC CTTGTACCGC CGGTTGGTTG AGCCCTTAGA 
    CATTGCAAAC TACTATAGGC ATTCCAAGAA CGAGGACACT GGCTCCTACC 
    TCTCCAAGGG AAGGCCAAGA CGTTACAAGT ACACCCAGGA GTGGCACGAG 
    CAGTCGCAGC GCATCTCCTT CGGTTCTAGC CTTGAGTCTT GCTTCTGGGC 
    AATGGCTGAG GAACTCCAGG CTGAGATTGC TAACGGCAAA ACATTCGAGG 
    ATGTGAGAGA TAGAGTAGTT AAGCTTGAGA GTGATGCTCA CGGATGGTCC 
    ATGTCTGGAA GTTTAGGGAA GGATATATTC CTGAGCCGTT CTTCTTTTGT 
    GATTTGGTGG AAGACGCTCC CGGAGAACCA CAGATCTGCA TCATGCATCG 
    CGAAACTTGT GCCCTGGTAA GGAAGCTTTA CATTATATGG ATAGAATTAT 
    TTGCCTTCAC AATGATGAGG CAGGCATTCG TGGCATGTTG CAACTACTGC 
    CACTGTAACT GTATACCATA TGCATGAACT TTGTAAATAT GCTACTTCGC 
    GTTTTTGTAT CCTACACAAT ACAATCAGTT CAAGTTGAAC C

    Gene models with high sequence identity

    1. AT3G48090.1 [+] show detail - alpha/beta-Hydrolases superfamily protein
      E-value: 1e-105; Score: 381.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily alpha/beta-Hydrolases 1e-22
    HMMPfam Lipase, class 3 6.1e-18
    Gene3D no description 4.3e-16
    FPrintScan PRICHEXTENSN 1.6e-11
    FPrintScan PRICHEXTENSN 1.6e-11
    FPrintScan PRICHEXTENSN 1.6e-11
    FPrintScan PRICHEXTENSN 1.6e-11

    See the detailed result >

    AT3G48090.1

    Model type
    Protein coding
    Short Description
    alpha/beta-Hydrolases superfamily protein
    Curator Summary
    Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases.
    Computational Description
    enhanced disease susceptibility 1 (EDS1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48080.1); Has 536 Blast hits to 485 proteins in 45 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 2; Plants - 491; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR