K24412

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased width (PATO:0000599) (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K24412

Determination of introduced cDNA(s)

J023016K03 - Rice Full-length cDNAs - Original: J023016K03

full reading [+] show sequence

GGGTCGCCTC CCTCGCTCGC CGCCTCCCCC GCTTCCGCTC GCTCACCACC 
ACCAACTCCT CCTCGTCTTC ATCAACGCGC TCGGTCGCCT CGCCTCGCTC 
TGGAACGCAT GATGGCGAGC ATGGCGGCGC TGCTGCAGCG TCTGCTGGTG 
GTGGTGAATC AGGTGGACCC GGGCGCGCCG GGGTTCTGGC GGGAGTTCTT 
GGTGGGCATG CTGAAGCCGG TGGCGGCGAC GGCGGTGGTG GCGATGGCGG 
TGGCGCTGAG CTTCACGCAG CGGCTGGGGC TCGAGGGCGA GATGCTGTAC 
GCCATGGCGC GGGCGTTCCT CCAGCTCTCC GTCATCGGCT TCGTCCTCCA 
GTTCATCTTC ACCCAGAAGA GCGCCGCCTG GATCCTCCTC GCCTACCTCT 
TCATGGTCAC CGTCGCCGGC TACACCGCGG GGCAGCGCGC CCGCCACGTC 
CCGCGGGGGA AGCACATCGC CGCCGTCTCC ATCCTCGCCG GCACCTCCGT 
CACCATGGCC CTCCTCGTGG CGCTCCGGGT GTTCCCGTTC ACGCCGCGGT 
ACATCATCCC GGTGGCCGGG ATGATGGTCG GGAACGCGAT GACGGTGACC 
GGGGTGACGA TGAAGAAGCT GAGGGAGGAC GTGGGGATGC AGCGAGGGGT 
GGTGGAGACG GCGCTGGCGC TGGGCGCGAC GCCGCGGCAG GCGACGGCGC 
GGCAGGTGAG GAGGTCGCTG GTGATCGCGC TGTCGCCGGT GATCGACAAC 
GCCAAGACGG TGGGGCTGAT CGCGCTGCCG GGCGCCATGA CCGGCCTCAT 
CATGGGCGGC GCGTCGCCGC TGGAGGCCAT CCAGCTGCAG ATCGTGGTGA 
TGAACATGCT CATGGGCGCT TCCACCGTCA GCAGCATCCT CTCCACCTAC 
CTCTGCTGGC CGGCCTTCTT CACCGGCGCC TTCCAGCTCA ACGACGCCGT 
CTTCGCCGCC GACTAATCTT CCCTCTTCCA CAACACCTTG CATTTTGATT 
CATTATGGAT TACTGCTTAG TGATTAGTAG TAGTAGTAAT TAGTTGTTGA 
GTACTTACTT AGTAGGACGA GAGAGAAAGT AAGAGTGTGT ATGTCTTGAG 
GTTAATTTCT TCTTCCATAA TAAATCATGT GTTGATGACT T

Gene models with high sequence identity

AT2G37330.1 [+] show detail - aluminum sensitive 3
E-value: 2e-104; Score: 375.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Conserved hypothetical protein CHP00245	3.8e-58
HMMTigr	Conserved hypothetical protein CHP00245	1.3e-56

See the detailed result >

AT2G37330.1

Model type: Protein coding
Short Description: aluminum sensitive 3
Curator Summary: Encodes an ABC transporter-like protein, without an ATPase domain, required for aluminum (Al) resistance/tolerance and may function to redistribute accumulated Al away from sensitive tissues in order to protect the growing root from the toxic effects of Al.
Computational Description: ALUMINUM SENSITIVE 3 (ALS3); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00245 (InterPro:IPR005226); Has 1906 Blast hits to 1906 proteins in 934 species: Archae - 39; Bacteria - 1722; Metazoa - 0; Fungi - 12; Plants - 43; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink).
Link: InterPro Scan - TAIR