K24606

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K24606

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K24606

Determination of introduced cDNA(s)

  • J023022F21 - Rice Full-length cDNAs - Original: J023022F21

    full reading [+] show sequence

    Nucleotide sequence: J023022F21 - full reading 
    GAAGCGAAGA GGGCGACGTC GAGGTCGTCG TCCTCGACGG CTTCGCCGGC 
    CGCGCAAACC GCCGAACACA TCGCCTTCGC GCGACCAAGG CGGCCTCTCG 
    CTGTCGCCTC GCCTCCCTCC CCGACGACTC CGCCGCGTCC CCGTCAAAAA 
    ACAGCATCCA CCGCCGCCAT CTCCGCAATG GTGGCCGCGT CGCCGCTGGC 
    TCCTCCTCGC GATGGCCCTC CCCTGCGCCT TCCTCTCCGC CGCCGCCGCC 
    GCCAACGCCA CCTCCTTCTC GTCGTCGCCG GAATCCAGGC GATGCCGTTC 
    AGTACACCGC GTTCCCTCCC GACCAAGGCC TCCCCTCGCG CCGCCGGCCC 
    GTGTGATGGG CAAGGGTAAT AGCAAGAGGA AGGCGGCGAA CACCCGGCTG 
    TGGATGCGGC TGGATCGGCG GGGCGGGTGC GAGATGATCC TGTGCGATAA 
    GTCCTTCGTC GCCCGCCGCT CCGGCTTGCC GGCGCGCGAC CTCCGCGTCC 
    TCAGCCCCCT CCTCTCCCGC TCCCCCAGCA TCCTCGCGAG GGAGAAGGCT 
    ATGGTAATCA ATCTGGAATT TGTTAGAGCA ATCGTAACTG CTGATGAGGT 
    GCTGGTGCTG GAACCTCTTG CTCAAGAGGT TCTCCCTTTC GTTGAGAAAT 
    TAAGGAAGTA TTTCCCACTG AAAAGTCTGG ATGTTGATGA TGTCTCTACC 
    CATATGCATA CGGAAAACCA AGATGGCGAA CTTGCTCAAG ATGTTTCCTG 
    TTATGAGGTA GAAGGGGCCA ACCATGAGCT TCCATTTGAG TTTCAGGTTT 
    TGGATTTCGC CCTAGAAGCA GTGTGCTTGT CGTACAACTC CACCATATCT 
    GACCTTAACA GGAGTGCCAT TGCTGTGCTG GATGATCTGA TGAAGAGTGT 
    CAGCACTAGG AATCTTGAGC GCGTCTGGAG CCTGAAAAGC AGCCTCACTC 
    GCTTGCTTGC AAGTGTGCAG AAGGTCAGAG ATGAAGTAGA GCATATTTTG 
    GATGATAATG AAGCTATGGC ACATCTGTGT ACAGCAAGGA AAACAAAAGG 
    ACAGAAGGAT TTATTGAACA CCATTTTATT TCCAGAAACA AGACTCTGTA 
    GAACACACTC TAGTATTGAG AACAGTACTG GCATTCGTAC ATGTGTTCCT 
    TCGGATAGCG ATGCTCATAT CTTAGATATG TTATTGGAAG CCTATTTCAA 
    GCAGCTTGAT GGGATTCGCA ACAGAATTTT CTTGGTTCGG CAGTATATTG 
    TTGACACAGA AGATTATATC AGCATCCAAC TTGACAACAA ACGGAATGAA 
    CTCCTAGGGC TCCAGCTTAC CCTGATCATC GCATCCTTTG GCATAGCCAT 
    CAACACCTTC ATAGCTGCGG CTTTTGCGAT GAACATCCCT CACCGTGGGT 
    ATCATTTCGT TATTGGAGTA CCCTTTGGAC AATTTGTTGG AGCCACCTCA 
    TTTTTATGCA TGTCGATTGT CATACTGTTG TTCACATATG CCTGGAGGAA 
    CAGGTTGCTC TGCACTTGAG CTAGCACAAC CTCAGAGTAA TCAACAAGAG 
    CCTCACCTCT CACCTGTGAC ACTGATTAGT ATTCTTCTTC AGGATGCCTT 
    AGAATTCCTG TTCTATTTGT GCTTCAGAAG TTCAGAATAC CTCACCAACT 
    GCTTCTCAAT GTGGAAACGT GCAATCCATG AGTTATATAT ATTTCCTAAT 
    TTCCGACAAT GTAAAACAAG TTGCACTTAC TCTTATTTCA TGTGAAGGGG 
    AATCATTGTT ATTT

    Gene models with high sequence identity

    1. AT3G58970.1 [+] show detail - magnesium transporter 6
      E-value: 5e-80; Score: 295.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G58970.1

    Model type
    Protein coding
    Short Description
    magnesium transporter 6
    Curator Summary
    Transmembrane magnesium transporter. One of nine family members.
    Computational Description
    magnesium transporter 6 (MGT6); FUNCTIONS IN: magnesium ion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: transmembrane transport, metal ion transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: magnesium transport 5 (TAIR:AT4G28580.1); Has 803 Blast hits to 784 proteins in 174 species: Archae - 2; Bacteria - 26; Metazoa - 66; Fungi - 194; Plants - 407; Viruses - 2; Other Eukaryotes - 106 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR