K25251

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K25251

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K25251

Determination of introduced cDNA(s)

  • J013112L22 - Rice Full-length cDNAs - Original: J013112L22

    full reading [+] show sequence

    Nucleotide sequence: J013112L22 - full reading 
    AAAACCACTC CATTCATTGC ATGAATGAAG AAAGAACAGC TAGTGGTATG 
    GTAACAGTAG TAATGGCAGC AGTTAGCCAC AGCAACTGCT CCCCCTCCTC 
    TGCTTGCTGC TGCCACTACT GCCCTGCCCT CCTTGAGTTG GGTGAGTGAG 
    TGACAGTAGT GTGTGTGGTG TAGTGGTAGG AGAGGAGGAG TATCTCTTGT 
    ATGGCTGTGG CCTGTAGTAG GCTGTAGCCC CAAACCTCTT GTCTCCTTTT 
    CCCCTCCTCT CTCTCCCCCA CTCTACTTCA GTTCTTTGCT TGTTTGCTAG 
    CTTCTCTCAT TGCCTCTCTT GTTGCTTGAT GCTTTTAGGG AGAGTAGAGT 
    GGTGTAGTGT AGTGTTGAAT CCTCCTCCAC ATCTTGGAAC TTCTTCTTCT 
    TCTTCTTCTT CTTCTTCTTC TTCTTCAAAG TCTTCAAAGG CTTATCTTGG 
    GTGAAGAAGC ACCTGAAGCT TCCATCATTT TTGCTTTAAT GGTGGTGGTC 
    TTGGGGAAAC TTCTGAAGAA ATCTCCGGGG GAAAGATTGC TGCTTTGCTG 
    CTGGTTTCGC GGCAAATCTT GATTGATTGC GTTGGAAGAG GTCGGCTTCG 
    TGAAGGAATC TTGCTTGCGG GATCAATCGC CTCCGCTCGC TTGCTTGCTT 
    TTTGGGCGGT TCTTGGTGCT GCTTTATTGG GGTGAAAGGT TGGGGGATCT 
    CGCGGCCACT CGAGGTAGCG AGCGATCTCC CCGCGGCTTC TCCTCGTTGC 
    CGGCATTGCG GGGGAGGCGA GCTCGCCGCC GGGTCGCTTG TTGATGCGGT 
    GAGGCGGCGG AGCGGAGCTT CTCGCTGTGC TGCTGCTGCG GCGGCCGCCA 
    GGTGTTCGGT GAAAGGCGCG AGCAAGCGAG CATGAGGGAC TTCCCTTCCT 
    GCTTCGGGGA GAGCGGCGTC CAGATCGCGG ACGCGTCGTC GTCGTCGTCG 
    AGCGCCGGAA AGGGCGCGGC GCAGAATCTG GTGACCTGCC TCTACCAGGC 
    GCAGTTCTCG GGCCGGCCAT GCCTGATCTC GGTGACCTGG AGCAAGAGCC 
    TCATGGGGCA AGGGCTCAGC ATTGGCGTGG ACGATCTGTC CAACCAGTGC 
    CTGTGCAAGG CAGACATCAA GCCATGGCTC TTCTCCAAGA AGAAGGGCTC 
    CAAGAGGCTT GACGTCGAGG ACGGCAAGAT TGAGATCTTC TGGGACCTGT 
    CCGGTGCCAA GTTTGGTGCT GGGCCAGAGC CAATGGAAGG GTTCTATGTC 
    GCCGTGGTGT TTGACCTTGA GCTGATACTC CTGCTCGGCG ACATGAAGAA 
    GGATGCATAC CGGAAGACCG GCGCAAACCG GCCGATGCTG AATGCTGCAT 
    TTGTGGCTAG GAGGGAGCAC ATATATGGGA AGAAGATTTA CACTGCCAAG 
    GCACAATTCT GTGAAAATGG TCAATTCCAT GATGTTGTGA TAGAGTGTGA 
    CACCGTCAGC CTCAAGGATC CATGTCTTGA GATACGGGTC GACAAGAAGC 
    CCGTCATGCA GGTGAAGCGT CTGGCTTGGA AATTTAGGGG AAACCAGACA 
    ATTCTTGTGG ATGGTTTGCC CGTGGAGGTG TTCTGGGATG TCCACAGTTG 
    GCTGTTTGGA TTGACGACAA GCAATGCGGT GTTCATGTTT CAGACATGCC 
    AAGCACCTGA GAAGTCGATG CCTTGGTCAT ACTCGCAGGT TTTTAGGGAG 
    TCTCAGTTGC AGGGTCTTGG TTTCTCGCTG ATCCTATATG CATGGAAGCT 
    TGAATAGGTT CTTGCAGAAT CATAATTTGC TTCTGCAATT GCCTCCGTTT 
    TAGTGCTAAC GGGATGTTTA TTGAGTGTCA ATTCTTGGAA ATGTTATGGA 
    GGCTCTCCAA TATATGTTCT TTCAATTTTT CTTGGTTTTG CCATCTTTTA 
    TAAACACTGT TTGAATAGTT TGGCAGGATT CTGTGACAAT CCTGTGATTC 
    TCAAATTCCC TTCCTTTTGC TCCTAATGCT CTCAATAGTT TACTGTGGCA 
    ATGCTCCAAG AAAGAATGTT GTCATGATGT AAAGTACTTC AAAGTTCGGA 
    TATAGATTAT TTGTTAATAG CG

    Gene models with high sequence identity

    1. AT5G28150.1 [+] show detail - Plant protein of unknown function (DUF868)
      E-value: 1e-98; Score: 358.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G28150.1

    Model type
    Protein coding
    Short Description
    Plant protein of unknown function (DUF868)
    Computational Description
    Plant protein of unknown function (DUF868); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT3G04860.1); Has 292 Blast hits to 290 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 292; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR