K25429

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K25429

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K25429

Determination of introduced cDNA(s)

  • J013001E03 - Rice Full-length cDNAs - Original: J013001E03

    full reading [+] show sequence

    Nucleotide sequence: J013001E03 - full reading 
    TTGAGTCATC AAGAGCTGAA AAATCTTCGT CTTCATCATG CGCCATTTTG 
    AGCTCCTCCT CTTCCTCCTC CTCTGCTCGC CGTGCCTCTT CTCAGTCTCC 
    GATGGGAGGA CGGTGCGGCC CGCGAAACGG GGCGCCCCGT CGCCCCCCAT 
    TCGGGCGGTG AACCTTGGAG GTTGGCTCGT CACGGAGGGC TGGATCCTTC 
    CCTCCCTCTT CGACGACATT CCAAACAAAG ACCTCCTGGA TGGAACCCAG 
    CTGCAATTCA AGTCGGTGAC GCAGAACATG TACCTGTGCG CCGAGCAGGG 
    CGGCGGCACC ATCCTGGTGG CGAACCGGAC GAGCGCCTCG GGGTGGGAGA 
    CCTTCAAGCT GTGGAGGATC GACGAGGACA CGTTCGACCT CAGGGTGTTC 
    GACAACCTGT TCGTCACCGT CGCCGGCGAC GGGGTCACCG TCGTGGCGAC 
    GGTGGCGTCG CCGGGGCCCG GGGAGGCGTT CCAGATCGTG CGCAACGGCG 
    ACAAGACTCG CGCGCGCATC AGGGCACCCA ATGGCATGTT CCTGCAGGCG 
    AAGACAAGCG ACTCAGTTAC AGCAGATTAT GATGGGGAGA CAAATTGGGG 
    CGACGATGAC CCCTCTGTGT TTGTGGTCAC TAGGGTAGGC GGTCTACAAG 
    GGGAGTACCA AATATGCAAT GGATATGGTA AAGCAAAGGC CACACAAGTG 
    CTCAGGGAAC ACTGGCGCAC ATACATAGTT GAGAGCGACT TCAAGTTCAT 
    ATCAACAAGT GGGCTAAACG CAGTGAGAAT TCCAGTTGGA TGGTGGATTG 
    CTAGCGACCC CAATCCTCCT GCTCCTTTCG TTGGAGGATC CCTCCAAGCC 
    TTGGATAATG CATTCAAATG GGCAGAGAAG TATAATTTGG GAGTCATTGT 
    GGACCTGCAC GCTGCACCTG GGTCGCAGAA CCCGTTTGAG CACAGTGCCT 
    CCAGAGATGG TTCACAGGAC TGGGGCACCA CGGATGCCAA CATCGCCCAA 
    ACTGTCCAAG TCATCGATTT CCTCACACAC AGATACGCGA GTAGCCCCAG 
    CCTCCTGGCC GTGGAGCTCC TGAACGAGCC ACTGGCACCC GGGGTGACTC 
    TCCCGGCTCT CATGAGATAC TACAAGGACG GCTACAACGC CGTCCGCAAG 
    TACACCTCGA CGGCGTACGT GGTCATGTCC AACCGCCTCT CCGCCAGCAA 
    CACGGAGCTC CTCGGCTTCG CCGCCGGCTT CCCCGGCGCC GTCCTCGACG 
    TCCACTACTA CAACCTCTTC ACCAGCAGCT TCAACGGCCT CACCGTCGAC 
    CAGAACATCG ACTACGTCAG GACCAACCGC TCCGACGAAC TCAGCACCGT 
    CACAAGGCCG AATGGGCCGC TGACGTTCGT GGGAGAGTGG GTGGCTGAGT 
    GGAATGTGCA GGGAGCATCT AACCAGGATT ATCAGAGGTT TGCACAAGCC 
    CAGCTAGATG TTTATGGACG AGCTACCTTC GGATGGGCCT ATTGGACTTA 
    CAAGAACGTC AACAACCACT GGAGCATGCA GTGGAATATC CAGAATGGGA 
    TCATCTCTCT CAAAAGCTAG AAATAATGAC TAATAATTAA ATATGTCTCT 
    AGTTATCACC AATTAGAACA CGTAAATAAG CCTAACCAAG GCCAATTAGT 
    GAGTAATTAC TGTTGCCTAA TAATTGGAAA TGTGTATGTA CTTGCAGTCA 
    TATGTAATCC GTGAGCAAAT AAGACGTTGC GGAAGCGCAG ATAAAACGTC 
    AGGTACTCAG GTTGAGTGTA ACTTTCTCTT GTGAAGCTGA ATTAAAGAAA 
    TAAAGATTCT TCTTCCT

    Gene models with high sequence identity

    Not founds.

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Glycoside hydrolase, catalytic core 1.3e-84
    superfamily Actin cross-linking 1.1e-25
    Gene3D Glycoside hydrolase, subgroup, catalytic core 0.00039
    Gene3D Glycoside hydrolase, subgroup, catalytic core 6.9e-88
    PatternScan Glycoside hydrolase, family 5, conserved site 0
    HMMPfam Glycoside hydrolase, family 5 2.4e-20

    See the detailed result >