K25714

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K25714

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K25714

Determination of introduced cDNA(s)

  • J023149L07 - Rice Full-length cDNAs - Original: J023149L07

    full reading [+] show sequence

    Nucleotide sequence: J023149L07 - full reading 
    GGTGGCGCCG CGAGTTTCCT TTGGCAACCA ACCAAAGTCG TCGTCTTCCT 
    CCTCTCGCAC TTTACTCCCC TCCCCCTCCT CTCCCTCTTC CCCCAACTGC 
    AAAGCAGCTG TCCACCTCCA CGCTCCTCCT CCTCCCCCAA CCCCAACCTC 
    TCCGCCTTCC CTCTCGCCGG CGGCGGGGAT CCTCATCCGC CCCGCGACGC 
    CCGGCCCTAA CCGCGGCGGA GATCCGTGGA GGGTGGGGGG ACATTCTTGG 
    TAATTAAGCC GCGCGGCGCG CGCCTCCCCT CTTCTTCTTG GATTCGACGG 
    GGTGGCGCGG GGATGAACAC GAGGCCGGTG GTGCTCGTCT TCCTCCTGCT 
    GGTGCTCGTC ATCACGTCGC AGTTCGAGTG GAAGCAGCAG ATCGGGGACG 
    CCGCCGCCGA CCCCGCCGAC GCGCGCCGCA GGCACCAGGG CCTCGCCAAG 
    GAGGACGCCG TCAAGGAGAA GATAATATTT TCTCAGGAGA AAAATATTCA 
    ACAACTTAAC GAGCTTATTG AGAGCCTTCA GCGGCAGCTC CTGCATTGCC 
    GTGGTAGCAA CAACACTGTC CACACCACAA CAGTTTCTCA TACTGAAGTT 
    AGTGAGGTGG ACGGGCAGGA AAGCATTGAT GATTGATGGT ATTGGTAGAT 
    AACCTCTTGG CAGGTTGTTC ACTGATTCTA GTACAGAAGC CAAAGAACAA 
    CGGCTGATCA GGCAGCACCA TACTCTACAA ATGCCATCTA ATAGGGAGGT 
    ACCAAATCAC ACTGTATTGT ACACTTGCTA CCAGTGTTTC TCTGGTAAGA 
    TTGTAGAGAG CTGTAACATG TAATATGTTG GTTTTAGGTC ACGGCCACTA 
    ATTCAATTGA AAAGTTGCTT G

    Gene models with high sequence identity

    1. AT3G44280.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 7e-12; Score: 68.20

     

    InterPro Scan Digest

    See the detailed result >

    AT3G44280.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22280.1); Has 82 Blast hits to 82 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR