K25849

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased size (PATO:0000586) (Seed::Shape::large) increased length (PATO:0000573) (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K25849

Determination of introduced cDNA(s)

J013045J15 - Rice Full-length cDNAs - Original: J013045J15

full reading [+] show sequence

GAGTCGTCCT CGTCTTCTTC CACCTCAGCG ACCTAATCCC ATCGCCGTCC 
CGTCGCGGAG CTCAACTGCC ACTCCCATTC CTCCACAGTT CCGTACCTTC 
CCGGCCTTCT CCTTCCTCCC TTTCGGCTCG GGATCCGGCT GAAGCAGCTC 
TGCCGCGACG CCGACACCGA CCTCTCCGTC TGCGTCCTCG AGAAGGGCTC 
CGAAGTCGGT GCGCATGTAT TGTCGGGGAA CGTGTTCGAG CCACGAGCGT 
TGGATGAACT CATCCCGAAG TGGAGGCAAG AGGATACCCC AATAAGAGTC 
CCCGTCTCAT CTGACAAGTT CTGGCTGTTG ACAAAGAATA AGGCATGGAC 
ACTTCCATCT CCTTTCGATA ACAAGGGAAA CTATGTGATA AGCTTGAGCC 
AAATGGTGCG ATGGATGGCC TCCAAAGCTG AAGAATTGGG TGTTGAAGTA 
TATCCAGGTT TTGCTGCGAG TGAGGCGTTG CAACCAATGA TGTTGGTATT 
GCTAAAGATG GCTCCAAAAG GGAAACTTTT CAACCTGGTG TTGAACTAAG 
AGCTACTTAG AAAATGCAGG GCGAATGACA CTGTTGGCCG AGGGTTGCCG 
AGGTTCATTA TCAGAGAAAA TAATAAGGAA CCACAAGCTC AGAGAGAGTG 
GGCAAGGCCA GCATCAGACA TATGCTCTTG GAATTAAGGA GGTTTGGGAG 
ATCGAGGAAG GAAAGCACAA GCCAGGTTCT GTGATTCATA CTGTAGGGTG 
GCCTTTGGAC TCGAAAACAT ATGGAGGATC ATTTATGTAT CACCTTGATG 
ATAGACAGTT AGCGATAGGT CTGGTTGTTG CCTTGAACTA TCAAAATCCT 
TTCATGAGCC CATACGATGA ATTCCAGAAA TTCAAGCAAC ACCCTGCTGT 
CAGGACAATT TTGGATGGTG GAACAGTTCT TCAGTATGGT GCTCGTACGT 
TGAATGAAGG TGGTTTTCAA TCAATACCAA ATCCAGTTTT CCCTGGAGGT 
GCAATTATTG GATGCTCTGC AGGGTTCCTT AATGTTCCCA AAATAAAAGG 
AACTCATACA GCCATGAAGT CAGGTATGCT GGCTGCAGAA GCAACTTTCA 
AAACTCTTGT TGAAGGATCT TCGATGGAAC TCTATTGGGA GAATCTCAAG 
AAGTCATGGA TATGGGAAGA GCTTTATAGA GCTCGGAATT ACAGACCAGC 
ATTTGAATAT GGATTTATTC CAGGCATTGC CTTGTCTGCA CTGGAACGAT 
ACGTATTCAA AGGAAAGTCC CCCTTTACCT TAAAGCACGG GATACCTGAC 
CATGAAGCAA CAGATATGGC CAGTTTGCAC TCGCCTATTC AATATCCGAA 
ACCAGATGGT CAAATATCCT TTGACGTACC AACTTCTTTA TACAGGAGCA 
GCACAAACCA TGAGCATGAT CAACCTCCTC ATCTCCGTTT GAGGGATCCT 
ACAGTACCGG AGAGAGTAAA TCTTCCTCTG TATGCTGGAC CAGAGTCACA 
TTATTGTCCA GCTCGAGTTT ACGAGTATGT CACCGACGAG AAAGGTGACC 
AGAAGCTTCA CATAAATGCT CAAAATTGTC TTCATTGCAA GGCTTGTGAC 
ATCAAAGATC CAAAGCAAAA CATCGAATGG ACCGTTCCAG AAGGTGGAGG 
CGGTCCAGGG TACACAGTAA TGTAGACGAT AGCAAAATAC TGCCTGATAC 
CATGAAAACA TTAACCGAAA GGCAATAAAT TATCATCATG TATAGAGGAC 
ATCATGAAAT AATGTATGGT ATATTTCTTC TGGTCAATGT GAATTCAACC 
TATACTTGTC

Gene models with high sequence identity

AT2G43400.1 [+] show detail - electron-transfer flavoprotein:ubiquinone oxidoreductase
E-value: 0; Score: 44.30

InterPro Scan Digest

Program	Description	E-value
HMMPanther	PTHR10617:SF1	0
HMMPanther	PTHR10617	0
HMMPfam	Electron transfer flavoprotein-ubiquinone oxidoreductase	7.5e-38
superfamily	SSF51905	1.5e-06
HMMPanther	ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXI	9.1e-46
HMMPanther	FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE	9.1e-46
superfamily	FAD/NAD(P)-binding domain	3.9e-09

See the detailed result >

AT2G43400.1

Model type: Protein coding
Short Description: electron-transfer flavoprotein:ubiquinone oxidoreductase
Curator Summary: Encodes a unique electron-transfer flavoprotein:ubiquinone oxidoreductase that is localized to the mitochondrion. Mutants are more sensitive to sugar starvation when plants are kept in the dark for long periods.
Computational Description: electron-transfer flavoprotein:ubiquinone oxidoreductase (ETFQO); FUNCTIONS IN: electron carrier activity, catalytic activity, electron-transferring-flavoprotein dehydrogenase activity; INVOLVED IN: response to absence of light, leucine catabolic process; LOCATED IN: mitochondrial envelope, mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Electron transfer flavoprotein-ubiquinone oxidoreductase (InterPro:IPR007859); Has 5881 Blast hits to 5877 proteins in 1100 species: Archae - 188; Bacteria - 2470; Metazoa - 147; Fungi - 158; Plants - 31; Viruses - 0; Other Eukaryotes - 2887 (source: NCBI BLink).
Link: InterPro Scan - TAIR